| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1881 |
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| Symbol | |
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| ID | 3917102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1984386 |
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| End bp | 1986902 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640444625 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_497155 |
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| Protein GI | 87199898 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.490789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGT CATCCCTTTA CGCATGTGCA TCATTCGTCG CGCTTTCCGG CGCATTCCTT
GCTGCGCCCG CAATGGCGCA GGAAGCTGCC CAGGCCGACG CCGCTGATGC CGTCCCCGAA
AGCGTCGGCC TCGACGCGAT CGTCGTCACC GCCTCGGGCC GCGACAAGAC GCAGCTCAAC
ACGTCGATTT CGGTCAGCTC GATCTCGGCC GAAACGATCT CGAACCTGAA GCCCAGCTCC
GAAGCCGAAG TCTTCCGCAG CATTCCGGGC ATCCAGGTGG CCGGCACATC GGGGCCCGGC
GGTAACTCGA ACATCGCGGT TCGCGGCCTT CCGGTCGCCA CGGGTGGCTC GCCCTTCGTG
CAGATCCAGG AAGATGGTCT GCCGACCGTC CTGTTCGGCG ACATCCAGTT CGGCAACAAC
GACTACTGGA CCCGCTTCGA CGCTTCGGTC GCCAACATCG AGGGCGTTCG CGGTGGTTCG
GCCACGACCT TCGCCTCGCA GGCACCGGGC GCGGTGATCA ACTACATCAG CCACACCGGC
AAGGATGAAG GCGGTTACGT CCAGGTCGGC AAGGGTCTTG GCTATGACGA GACCAAGGTC
GATTTCCGCT ATGGCGGGCC GATCAACGAT ACCACGTATT TCCACGTCGG CGGCTTCTTC
AAGAACGGCC GTGGCCCGCT GCATGCTGAC TATACGGTGT CGGATTCGAT CCAGGTCAAG
GGCAACCTGA CCAAGGAGTT CGACGGTGGG CGCGGCTATT TCCGCCTGAT GTTCAAGTAT
GCCGACACGC AGGAGCCGAA CTACACCGGT TCGCCCGCTC TCGCCACGAT CAACGGCAAG
AAGGTCACGA ACATCCGCCC GTTCCCCGGG TTCGACGGTC GCGACAGCTC GAACTACTCG
ATCTACAATC AGGATTTCCT CATCTACAAC CGCGAGGGCA ACCTCGAGCG CACGAAGATG
GACGGCATCA CCACCAACGC GAAGTCGTTT GGCGGCCAGT TCCACTATGA GTTCGACGGC
GGCATCACCG TCGACAACAA CATGCGCTAC ACAGACATGA GCGGCGGCTT CACCTCGCCG
TTCCTGAACG TCGCGCGCAC GTCGTCGGTG CTGGGTTCGA CCGTCAACGG TGCGACCGTT
GCCACGATCA AGTACGCCAG CGGCCCCAAG GCCGGCGAGG TGTTCACCGG CGAGTATCTC
GACAACAACG TCAACGTCGA CACCCGCATC CGCGACATAG GCAGCTTTGC CAATGACCTG
ACGGTCGCAG GCAAGTTCGA TGTCGGCACC GGCAAGGTCA CCGCGCGCGC CGGCGTGTTC
TACATGAACC AGAAGATCGC GATGGACTGG CACGTCAACA AATCGTTGCG CGAACTGAAC
GGCGACAATC CATCGCAACT CGACCTGTTC GACAGCGCCG GCAACAAGCT GACCCAGGCC
GGCACCGCGG GCTACAACAA CAACTGGGGC AACTGCTGCG CCCGCGACTA CGACCTGTCG
TATGCAAACA CCGCACCTTA CATGTCGCTC GACTTCGACC ATGACCTGTT CGACATCGAT
GGGTCCGTCC GTTTCGAGCG GGTGAAGGCC AGCGGCTATG CCATTGGCGG CGGCGATGAG
TTCGACGTTG TCAGCGGCGG CGTGACCATC CCGACGATCA CATCGGACGG CGTGCGCGAG
GATCTCAACT ACACCCGCAG CTACACCTCC TACACGGTCG GTGCGCTGTT CAAGGCCAGC
TCGAACCTGT CGATCTTCGC CCGCACCTCG CGCGGTGGCC GCTTCAACGG CGACCGCCAG
ACCCTGGGCG GCAAGATCCG CAACGACGGT GCCCTTTGCA CCTCGGCCGA TGCCGCGGCA
GGAAACGGAG GCTGCACGGC CGATGGCGTC ACGCCTTCGG TTGACTTCGT CAAGCAGCAC
GAACTCGGCA TCAAGAGCCG TGGCGGTCTG CTCGGCGGTC GCTTCACGCT GGAACTGACC
CTGCTCAAGG GCAGCTTCAA GCAGTCCACC TACGAACTCT CGGCCACGAA GTGCCCGGGT
GGAGCAGGCG GCTGCGTGAT CGATGCCAAG TACAAGTCGA CCGGCGCCGA AATCTTCGCG
ACCTATCGCA ATGGCGGCTT CAGCCTCGTC GGCAACGCCA CCTATTCGAA GGCCAAGAAG
CAGGCCGCAG GCGCAAGCAG CTATACCCGC GCTGACGGTA TCCCCGACCT GATCTACACT
CTCTCGGCGA ACTACGACGT GGGTGAGATC GCGACGTTTG GCCTTGCCGT GACCGGCCAG
ACCAGCGCCA TCGACAGCGC GGGCTACGAG TATCCGGGCA AGGCGATCTT CAACCCGTCG
CTGCGCGTCT ATCCGATCCG GAACCTCGAG CTCGGCCTGC AGGTCTACAA CGTGTTCGAC
ACGTTCGACC TGCGCGGCAA CGGCGGCATC GCGGATGCTT CGGTCAACCC GACCGTCATC
AGCGGCGCTC CCGCGCTCGG CCGCACGGTT TCGGCTTCGG TGCGTTACAG CTTCTGA
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| Protein sequence | MKLSSLYACA SFVALSGAFL AAPAMAQEAA QADAADAVPE SVGLDAIVVT ASGRDKTQLN
TSISVSSISA ETISNLKPSS EAEVFRSIPG IQVAGTSGPG GNSNIAVRGL PVATGGSPFV
QIQEDGLPTV LFGDIQFGNN DYWTRFDASV ANIEGVRGGS ATTFASQAPG AVINYISHTG
KDEGGYVQVG KGLGYDETKV DFRYGGPIND TTYFHVGGFF KNGRGPLHAD YTVSDSIQVK
GNLTKEFDGG RGYFRLMFKY ADTQEPNYTG SPALATINGK KVTNIRPFPG FDGRDSSNYS
IYNQDFLIYN REGNLERTKM DGITTNAKSF GGQFHYEFDG GITVDNNMRY TDMSGGFTSP
FLNVARTSSV LGSTVNGATV ATIKYASGPK AGEVFTGEYL DNNVNVDTRI RDIGSFANDL
TVAGKFDVGT GKVTARAGVF YMNQKIAMDW HVNKSLRELN GDNPSQLDLF DSAGNKLTQA
GTAGYNNNWG NCCARDYDLS YANTAPYMSL DFDHDLFDID GSVRFERVKA SGYAIGGGDE
FDVVSGGVTI PTITSDGVRE DLNYTRSYTS YTVGALFKAS SNLSIFARTS RGGRFNGDRQ
TLGGKIRNDG ALCTSADAAA GNGGCTADGV TPSVDFVKQH ELGIKSRGGL LGGRFTLELT
LLKGSFKQST YELSATKCPG GAGGCVIDAK YKSTGAEIFA TYRNGGFSLV GNATYSKAKK
QAAGASSYTR ADGIPDLIYT LSANYDVGEI ATFGLAVTGQ TSAIDSAGYE YPGKAIFNPS
LRVYPIRNLE LGLQVYNVFD TFDLRGNGGI ADASVNPTVI SGAPALGRTV SASVRYSF
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