Gene Saro_1459 details

Gene Information

• Locus tag: Saro_1459
• ID: 3916124
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_007794
• Strand: +
• Start bp: 1502365
• End bp: 1502853
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640444202
• Product: IS6 family transposase
• Protein accession: YP_496736
• Protein GI: 87199479
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3316] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.835209
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGGCT TCCGGCACTG GCGTTGGCAC CTGGATGAGA TGTACGTGAA ACTGAACGGC 
GAGATGGTCT ATCTCTGGCG TGCGGTCGAC CACGAGGGTG AGGTGCTGGA GAGTTTTGTC 
ACCAGAAAAC GGGACAAAGC CGCGGCTTTG ACCTTCATGA AGAAGGCGTT GAAGCGGCAT 
GGAAAGGCCG AGGCCATCGT CACCGACGGG CTGCGTTCTT ACCCTGCGGC GATGCGGGAA 
CTGGGCAATG AGGGGCGACG CGAAGTTGGC CGGCACCTCA ACAATCGCGC GGAAAATTCA 
CACCTGCCGT TCCGACGAAG AGAGCGGGCG ATGCTGCGGT TTCGGCAGAT GAAGTCGCTG 
CAGAAATTCG CCTCGGTCCA TGCCTCCATC CACAACCACT TTTCCCAGGA ACGCCACCTC 
GTCGACCGAC TAACCTTCAA GGTTCGCCGC TCGGCCGCGC TGGTCGAGTG GCAGTCGCTT 
GTGGCCTGA 

 

Protein sequence

MRGFRHWRWH LDEMYVKLNG EMVYLWRAVD HEGEVLESFV TRKRDKAAAL TFMKKALKRH 
GKAEAIVTDG LRSYPAAMRE LGNEGRREVG RHLNNRAENS HLPFRRRERA MLRFRQMKSL 
QKFASVHASI HNHFSQERHL VDRLTFKVRR SAALVEWQSL VA