| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0914 |
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| Symbol | |
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| ID | 3918000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 967462 |
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| End bp | 969150 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640443648 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_496193 |
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| Protein GI | 87198936 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00560774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCA TACCAGCTAA CGAAGGCTTC GATGCGCATC ACGATGCGCA CGACCACGAC
CATGATCATC CGGGCTTCTT CGCCCGGTGG TTCATGTCCA CCAACCACAA GGACATCGGT
ACGATGTACC TGATCTTCGC GATCTTCGCG GGGGTCATCG GCGGCGCGGT TTCGGGCATG
ATGCGTGCCG AACTCGCACA GCCGGGCATC CAGTACCTGG GCATGTTCGC CGAATTCCTC
GGCGAGAAGA ACCCGAGCTT CGACCAGCAG CTCCACCTGT GGAACGTGCT GATCACCGCG
CACGGCCTGA TCATGGTGTT CTTCATGGTC ATGCCCGCGA TCATCGGCGG CTTCGGCAAC
TGGTTCGTTC CGATCATGAT CGGCGCGCCG GACATGGCGT TCCCGCGCAT GAACAACGTC
TCGTTCTGGC TGACCTTCGT CGGCTTCTGC TCGCTGATGT TCTCGGCCTT CGTGCCGGGC
GGCACCGGGC AGGGCGCCGG CACCGGGTGG ACGGTCTACG CGCCGCTCTC CACTTCGGGC
TCGGTCGGTC CGGCCGTCGA CTTCGCGATC TTCTCGCTGC ACCTTGCGGG CGCGGGTTCG
ATCCTGGGTG CGATCAACTT CATCACCACC ATCTTCAACA TGCGCGCGCC GGGCATGACC
CTGCACAAGA TGCCGCTGTT CGTGTGGTCT GTGCTGGTTA CCGCGTTCCT GCTGCTGCTG
TCGCTGCCGG TCCTTGCCGC CGCGATCACC ATGCTGCTGA CCGACCGCAA CTTCGGCACG
ACGTTCTTCG ATCCGGCCGG CGGCGGTGAC CCGGTTCTGT ACCAGCACCT GTTCTGGTTC
TTCGGCCACC CCGAAGTGTA CATCATGATC CTGCCGGGCT TCGGCATCAT CAGCCAGATC
ATCTCGACCT TCAGCCGCAA GCCGGTCTTC GGCTACCTCG GCATGGCCTA CGCCATGGTC
GCGATCGGCG TCGTCGGGTT CATCGTGTGG GCTCACCACA TGTACACCAC CGGCCTCGAC
GTGAACACGA AGATGTACTT CACCGCCGCA ACCATGGTCA TCGCGGTGCC GACCGGCATC
AAGATCTTCT CGTGGATCGC GACGATGTGG GGCGGCAGCC TCGAGTTCAA GTCGCCGATG
GTCTGGGCGA TCGGCTTCAT CTTCCTCTTC ACCGTGGGCG GCGTGACGGG CGTCGTGCTG
GCCAACGGCG GCGTGGACGA CAACCTGCAC GACACCTATT ACGTCGTCGC GCACTTCCAC
TACGTGCTGT CTCTGGGTGC CGTTACCGCG CTCTTCGCCG GGTTCTACTA CTGGTTCCCG
AAGATGAGCG GCCGCATGCA CTCGGAGTTC CTTGCGCACC TGCAGTTCTG GATCTTCTTC
GTCGGCGTGA ACCTGATCTT CTTCCCGATG CACTTCCTCG GGATCCAGGG CATGCCGCGC
CGCTATCCGG ACTACGCGCT GGCCTATGCC AAGTGGAACG AAGTGGCCTC GATCGGCTAC
GCCATCATGG CGGTATCGAT CGTGATCTTC TTCATCAACA TCCTCTACGC ATTCCTTGCC
GGCAAGAAGG CGGAAGCCAA CTACTGGGGC GAAGGTGCGA CGACGCTGGA ATGGACGCTG
TCCTCGCCGC CGCCGTTCCA CCAGTTCGAG ACACTGCCGG TGATCGACGA CAAGGCCCAC
GCACACTGA
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| Protein sequence | MATIPANEGF DAHHDAHDHD HDHPGFFARW FMSTNHKDIG TMYLIFAIFA GVIGGAVSGM
MRAELAQPGI QYLGMFAEFL GEKNPSFDQQ LHLWNVLITA HGLIMVFFMV MPAIIGGFGN
WFVPIMIGAP DMAFPRMNNV SFWLTFVGFC SLMFSAFVPG GTGQGAGTGW TVYAPLSTSG
SVGPAVDFAI FSLHLAGAGS ILGAINFITT IFNMRAPGMT LHKMPLFVWS VLVTAFLLLL
SLPVLAAAIT MLLTDRNFGT TFFDPAGGGD PVLYQHLFWF FGHPEVYIMI LPGFGIISQI
ISTFSRKPVF GYLGMAYAMV AIGVVGFIVW AHHMYTTGLD VNTKMYFTAA TMVIAVPTGI
KIFSWIATMW GGSLEFKSPM VWAIGFIFLF TVGGVTGVVL ANGGVDDNLH DTYYVVAHFH
YVLSLGAVTA LFAGFYYWFP KMSGRMHSEF LAHLQFWIFF VGVNLIFFPM HFLGIQGMPR
RYPDYALAYA KWNEVASIGY AIMAVSIVIF FINILYAFLA GKKAEANYWG EGATTLEWTL
SSPPPFHQFE TLPVIDDKAH AH
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