Gene Saro_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0090 
Symbol 
ID3917538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp93172 
End bp94065 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content68% 
IMG OID640442815 
Producthypothetical protein 
Protein accessionYP_495373 
Protein GI87198116 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATT CAAGTGAACC CGGCCCGACT TTGCGGCCAC GCCCGATGCA TTTCCTTGCC 
CTGCTGACAG GAAACGTTGC GCTGGCCCTG GGACCCTGGT TCGTGCGTCT CGCCGACAGC
GGCCCGGTGT CCGCAGGCTT GTGGAGGCTG GCCCTGGCAC TGCCGCTGCT CGCGATCTTC
GCGCTGCGCG GGCGCGAGCC GATGTGGGGT TACCAGCGCA AGGACTGGGC GATCATTGTC
GGCGCGGGCG TGGTCTTCGC GCTAGACCTG GCAAGCTGGC ACGTGGGGAT CGAAAGGACG
CGGCTGGGCA ACGCGACGCT TTTCGGCAAT TCGGGCAGCG TGATCCTGAT GGTCTGGGGC
CTGATCGCCA TGCACCGCCG CCCCCACCTG CGCGAGTTCG CGGCGGTGGC GTTGGCGCTG
GGCGGGGCGG GACTGTTGCT CGGCCGCTCG ATGGAGATCG ACACGCGCAC GCTGGCCGGA
GACCTGTTCT GCATTCTCGC CGGGCTTTTC TATGTGGTCT ACATTCTGCT CGTTCAGCAC
GTGCGCGGCC GCTTCGGGTC GTGGAGCCTG CTGTTCTGGT CGAGCCTGGC CGGATGCCCG
GTTCTTCTCG TCACCGCGCT GGCGCTGGGC GAGCCGGTTC TTCCGGGCAC CTGGTGGCCA
CTGGTCGGCC TGATGCTCGC CAGCCAGATC GTCGGGCAGG GGCTGCTGGT CTATTCGCTA
CGCCACTTTC CGCCGCTGGT CATCGGCCTC GTCCTGCTGA CCCAGCCGGC GGTCTCGGTC
GTGGTCGGCT GGCTTTCGTT CGGCGAAGTC CTCGCGCTGC CCGATGCCAT CGGCATGGCA
CTGGTCGGTG CGGCGTTGGT GCTGGCGCGG CTGGGCGAGG GCAAGTCCGC CTGA
 
Protein sequence
MTNSSEPGPT LRPRPMHFLA LLTGNVALAL GPWFVRLADS GPVSAGLWRL ALALPLLAIF 
ALRGREPMWG YQRKDWAIIV GAGVVFALDL ASWHVGIERT RLGNATLFGN SGSVILMVWG
LIAMHRRPHL REFAAVALAL GGAGLLLGRS MEIDTRTLAG DLFCILAGLF YVVYILLVQH
VRGRFGSWSL LFWSSLAGCP VLLVTALALG EPVLPGTWWP LVGLMLASQI VGQGLLVYSL
RHFPPLVIGL VLLTQPAVSV VVGWLSFGEV LALPDAIGMA LVGAALVLAR LGEGKSA