| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4628 |
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| Symbol | |
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| ID | 3912445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5229937 |
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| End bp | 5230665 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886532 |
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| Product | SNase-like nuclease |
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| Protein accession | YP_488222 |
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| Protein GI | 86751726 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA CCTTCCTGCT TCCGCTCTGT CTCGTCCTGC TGTTGCCGGT GACGGCGCAG
GCTGCCGACG TCACCGGCGT TCCGAAGATC CGCGACGGCG ATCATGTCAC GATCGGCGGC
GCCCGTATCC GGCTGGCGGG CATCGACGCG CCTTCACTCG ATCAGCTGTG CCTCAACCCC
AAGGGCGAGC GATGGACCTG CGGCGTCGCC GCGCGCGACG CGCTGGCGGC CCACGTCGGC
GGCAAGAGCT GGACCTGCCG CGTTACGCGC ACGGAGAAGA ACGGCCTTTC GATCGCGAAA
TGCGAGGTCG ACGGCGAGGA CATCCAGCAA TGGATGGTCA AGAACGGCTG GGCGCTGTCT
TACGTTCGCG TCGCGCGCAC CTATGACGCC GACGAGAAAC TGGCGCGCGC GGCACGCGCC
GGATTGTGGC AGGGCGCGTT CATCGCGCCG TGGGACTGGC GGGTGCGCAA CAGCAAGACC
GCCGTTCTCG GCGCGACCAG GCCGCCGAAG AATGCGCGCC GAATTCTGCT CGCCTCGGCC
TCCGGCCCCG TCGCGCCGTC ACCAGACTGC ACCATCAAGG GCAACGTCAA CACGGCGGGC
GAGTGCATCT ATCACAAGCC GACCAGCCGC TGGTATGCCA AGATCAAGAT GACGATCAGC
AAGGGGACGC GCTGGTTCTG CTCGGTCGAA GAAGCCGAAG CCGCCGGCTG CCGCGAGACC
CGACGCTGA
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| Protein sequence | MLKTFLLPLC LVLLLPVTAQ AADVTGVPKI RDGDHVTIGG ARIRLAGIDA PSLDQLCLNP
KGERWTCGVA ARDALAAHVG GKSWTCRVTR TEKNGLSIAK CEVDGEDIQQ WMVKNGWALS
YVRVARTYDA DEKLARAARA GLWQGAFIAP WDWRVRNSKT AVLGATRPPK NARRILLASA
SGPVAPSPDC TIKGNVNTAG ECIYHKPTSR WYAKIKMTIS KGTRWFCSVE EAEAAGCRET
RR
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