| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3990 |
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| Symbol | |
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| ID | 3911797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4556625 |
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| End bp | 4557827 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885894 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_487594 |
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| Protein GI | 86751098 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.407707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.239363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA ATTCCGAGGT CTACGACGTC GTCGTTGTCG GCGGTGGTCC GTCCGGCGCC
ACTGCGGCCT GCGATCTCGC GCGGGCCGGC AAGCGCGTCG TGTTGCTCGA CCGCGCCGGT
CGCATCAAGC CCTGCGGCGG TGCGATCCCG CCGCGGGCCA TCCGCGATTT TGCCATTCCC
GACAGCATGC TGGTCGCCAA GATCAATGCC GCGCGGATGG TGTCGCCGAC CGACGTCGAA
GTCGATATGC CGATCGACGG TGGCTTCGTC GGCATGGTCG ATCGCGAGCA TTTCGACGAA
TGGCTGCGCC AGCGCGCCGC AAATGTCGGC GCCGAGCGCC GCACCGGACT TTTCCGGCGC
TTCACCCGCG ACGAGAGCGG CGTCAACATC GTGCACTACG AGGAGCGTCT ACCCGACGGC
ACGATGCAGG ACCAGACGGT CCGGGCGCGG GCGATCATCG GCGCCGACGG CGCGGTGTCG
GCGGTCGCGC GGCAGTTCTT GCCGGACGCC GACCGGGTTC CGTTCGTGTT CGCCTATCAC
GAGATCATCA AGGCGCCGCA GCCGGGACAG GCCGCGTACG AGAGCCGGCG TTGCGACGTG
TACTACCAGG GCAAGGTGTC GCCGGACTTC TACGGCTGGG TGTTCCCGCA TGGCGACACC
GTCAGCGTCG GCACCGGCTC GATGCACAAG GGCTTCTCGC TTCGCGACTC GGTCGCCGAG
TTGCGCAAGC AGACCGGGCT CGACGAGGTC GAGACCATCC GAAAGGAAGG CGCACCGATC
CCGCTGCATC CGCTGCCGCG CTGGGACGAC GGTCACAGCG TGCTGCTCGC CGGCGATGCG
GCCGGCGTGG TGGCGCCGGC GTCGGGCGAG GGCATCTACT ACGCGTTGGT CGGCGGCCGG
CTTGCGGCCG AGGCCGTCGG TGAATTTCTC GACACAGCGG ACGCGAAGGC GCTGAAGCTG
GCACGCAAGC GTTTCATGCG CGCGAACGGC TCGGTGTTCC GGATCCTCGG CCTGATGCAG
TGGTACTGGT ACGCCAACGA CAAACGCCGC GAGCAATTCG TCAGTATCTG CCGTGATCAA
GACGTCCAGA AGCTGACCTG GGACGCCTAC ATGAACAAGA AACTGGTCCG CGCCAAGCCG
ATCGCCCATG TCCGGATCTT CTTCAAGAAT CTGGCCCACA TGACCGGCCT GGCTTCGGTG
TAA
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| Protein sequence | MSENSEVYDV VVVGGGPSGA TAACDLARAG KRVVLLDRAG RIKPCGGAIP PRAIRDFAIP
DSMLVAKINA ARMVSPTDVE VDMPIDGGFV GMVDREHFDE WLRQRAANVG AERRTGLFRR
FTRDESGVNI VHYEERLPDG TMQDQTVRAR AIIGADGAVS AVARQFLPDA DRVPFVFAYH
EIIKAPQPGQ AAYESRRCDV YYQGKVSPDF YGWVFPHGDT VSVGTGSMHK GFSLRDSVAE
LRKQTGLDEV ETIRKEGAPI PLHPLPRWDD GHSVLLAGDA AGVVAPASGE GIYYALVGGR
LAAEAVGEFL DTADAKALKL ARKRFMRANG SVFRILGLMQ WYWYANDKRR EQFVSICRDQ
DVQKLTWDAY MNKKLVRAKP IAHVRIFFKN LAHMTGLASV
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