| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2942 |
|---|
| Symbol | |
|---|
| ID | 3910741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 3354459 |
|---|
| End bp | 3355793 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637884848 |
|---|
| Product | flavodoxin oxidoreductase precursor |
|---|
| Protein accession | YP_486555 |
|---|
| Protein GI | 86750059 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4097] Predicted ferric reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.636131 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACTC CGAGAGTGGC GACCGCATTC GTTGGAGCAG TCGGTATACT GCTGGGATTG
TGGCTGCTCA GCCTGGCGCC GGACGACTTC AGGCAAGGGT TCTGGGCCAC ACGCACGACG
CTGGTTTATG GCACCGGCGT GATGGCGCTC GGCCTGATGT CGATCGGCGT GATTCTGGCG
GCCCGGCCGG TGTGGTTCGA GACCCCCTTG GGTGGTCTCG ACAAATTCTA TCGCCTGCAC
AAATGGCTCG GGATTTCAGT GCTGGGGTTC GCGATTGCGC ATTGGCTGCT GCGCAAGGGG
CCGTCGTGGA TCAGCGAAAC TGGGCTGTTC GCGATCCCGC CGAAGCCGCC GCATGCGGAA
GGAGTTGAAC CCGGCTTCAA CCTGTTTGCA TACCTCAAGC ATCCGGCCGC GGAAATCGGC
GAGTGGGCGC TCTATGCCCT CATTGCATTG GTGGCGATCG CGCTGTGGAA ACGGTTTCCC
TACAAATATT TCTTCATGAC GCATCGGCTG ATGCCGGCGG TCTATCTGGT GCTGGTGTTT
CACGCCTTCA TCCTGATCGA CCGCAGCTAC TGGACCAAAC CGCTCGGTCC GGTGCTGGCA
GTTCTGTTGC TCGCCGGCAC GGTTGCGGCG CTGACCTCGC TGTTTGGGCG GATCGGCAGA
TCGCGAAAGG CAACCGGAGC GATCGCGACG CTGTCGCTGC ACGATGACAA CCAGATGCTC
GAAGTCGGTG TCCGGCTGCA AACCGCCTGG CGCGGGCACG AGGCCGGCCA ATTTGCATTC
GTCGACTTCG ATGATGTCGA GGCGGCACAT CCGTTCACCA TCACCTCGGC CTGGCACGAC
GACGGGTTGC TCGAGTTCTC GATCAAGGGG CTCGGCGACT ACACACGAAC GCTCGCGGCC
AGCTTGCACG TGGGGCAGGG GGTCGTTGTC GAGGGTCCCT ATGGCCGGTT CGATTTCCAG
GGCGATGGCA GCCGGCAGAT CTGGATCGGC GGCGGGGTCG GAATTACGCC CTTCATTGCG
CGCCTGAAAC AACTCGTTCG GGTCGGCCGG TCTGATCCGA TCGACCTGTT CTATGCGACG
AATACGCCGG ACTCCGGCTT CATCGCTCCA ATCCGGCGAC TAGCTCAGCA GACCGGGACC
GTGTTTCATC TGGTGGATGG TTCGCAGAAC GACCGCCTCA CCGTGGAGAA GCTCGCCGCC
ATGGTGCCGG AATGGAAGCA AGCCGACATC TGGTTTTGCG GCCCAAGCGC CTTCGGCGAC
GCCATGCGCC GAACGATGAT CACGCAAGGA CTGCCGGCTT CCCGCTTTCA TCAGGAGCTG
TTCGAAATGC GTTAG
|
|---|
| Protein sequence | MQTPRVATAF VGAVGILLGL WLLSLAPDDF RQGFWATRTT LVYGTGVMAL GLMSIGVILA
ARPVWFETPL GGLDKFYRLH KWLGISVLGF AIAHWLLRKG PSWISETGLF AIPPKPPHAE
GVEPGFNLFA YLKHPAAEIG EWALYALIAL VAIALWKRFP YKYFFMTHRL MPAVYLVLVF
HAFILIDRSY WTKPLGPVLA VLLLAGTVAA LTSLFGRIGR SRKATGAIAT LSLHDDNQML
EVGVRLQTAW RGHEAGQFAF VDFDDVEAAH PFTITSAWHD DGLLEFSIKG LGDYTRTLAA
SLHVGQGVVV EGPYGRFDFQ GDGSRQIWIG GGVGITPFIA RLKQLVRVGR SDPIDLFYAT
NTPDSGFIAP IRRLAQQTGT VFHLVDGSQN DRLTVEKLAA MVPEWKQADI WFCGPSAFGD
AMRRTMITQG LPASRFHQEL FEMR
|
|---|
| |