Gene RPB_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2596 
Symbol 
ID3910388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp2977141 
End bp2978679 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content72% 
IMG OID637884496 
Productcopper resistance protein 
Protein accessionYP_486210 
Protein GI86749714 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1276] Putative copper export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.449295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.663745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGT CGCTCGCGCA CGCCCACGCC AGCCTGGTCG CCAGTGATCC GGCTGCGGAG 
GCGGTGCTGG CGGCCGCGCC CGCGACCATC ACCCTGACCT TCAACGAGCC GGTCACGCCG
CTGGCGCTGC AATTGATAGA TGCCAGGGGC CGCTCGAGTG CCATCACTGA AGTCGCGACC
AATGGGGACA GGCTGAGCTT CGCACCGCCG TCGTTGCTCG GGGCGGGCGG CCACGTGCTG
AGCTGGCGCG TGGTGTCGGC CGACGGCCAT CCGGTCGGCG GCTCGCTGAC ATTCTGGATC
GGCACGCCGG GCGCGAGCTT GCCGGCGATT ATCGTACCCG ACGATCCGGC GCGGCGAGCG
GCGATCTGGG CGACGCGCGT CATGCTCGAA TTGACGCTGC TGGCGGCGCC CGGCGGCGCC
TTCTTCCTCG CCTGGATCGC TTCGGCTGCC TTGCCGGTCC TCGTGGCCGG CTGCGGGGCG
GTGGCGGTGC TGGGCCTCGG CGCGCTCGCG CTGTCGGTCG GGTTGCAAGG CCTCGACATC
CTCGACGCGC CGTTCGCGGA GCTCGGCAGC GCCGCGGTGT GGTGGGAAGG GGCAACCGGC
TCGTTCGGTC GCTCGGCGGC GATCGCCGCC GTCGCATTCG GCCTGACACT GTCGGCGCTG
CTCGGCCGCG GCGCGCCGGC GCGCTTGCTG TCGTTCGGCG CGGTGCTCGG CGTCGGTGCG
GCGCTCGCGG CGAGCGGACA TGCCGCGACC GCCGAGCCGC GCTGGCTCGC GACCGCTGCG
GTGCTGGTGC ACGGCGTGAG CCTGGCGTTG TGGGTCGGCG CGCTGCTGCC GCTCGCCGTC
ATGGTCGGAC CGAACCACGC CACGGCGAAC GTCACTCTGC GCCGGTTCTC CCGCACGATC
CCGATCGCGA TTGCAACGCT GCTGATCAGC GGCGTCGTTC TCGGCGCGAT CCAGCTCGGC
CGGATCGAGG CGCTGTGGAC GTCGGACTAC GGCCGCATTC TGTTCGCCAA ACTCGCGCTG
GTGGTGGCGC TGCTGCTGAT CGCGCTGTGG AATCGCCGCC GGGTGACGCC GCTTCTCGCC
GCCGGAACAC CACACGCGGC CTATGCGCTG CGCCGGACGA TCGCGGCCGA GCTGGTCCTG
GTGATCGCGA TCCTCGGGCT GGTCGGGCTG TGGCGGTTCA CGCCGCCGCC ACGCGCCGCG
ACAGCCGCTG CTGCGGAGGA CCGCGCCTTC GCCCATCTCC ACACCGGGCG TGCGATGGCC
AACGTCACCC TGACACCGGG CCACGCTGGT CCGATCGAGA TTGAGGTCAT GCTGCAGACG
CCCGACGAGA CGCCGCTGCA AGCGCAGGCG TTGACCGTGA CGCTCGCCAA TCCGGACGCG
GGGATCGAGC CGGCCTCCGC CGAGGCGCGG CGTCAGCCGG ACGGGCCATG GCGGGTGCGG
ATGTCGGCGC CGGTGCCCGG GCGCTGGTCG CTGACGCTCG GCATCCTGAT CTCGGATTTC
GACAAAGTGA CCATCGCGGC GCCGGTTGTG ATCCGGTAA
 
Protein sequence
MLPSLAHAHA SLVASDPAAE AVLAAAPATI TLTFNEPVTP LALQLIDARG RSSAITEVAT 
NGDRLSFAPP SLLGAGGHVL SWRVVSADGH PVGGSLTFWI GTPGASLPAI IVPDDPARRA
AIWATRVMLE LTLLAAPGGA FFLAWIASAA LPVLVAGCGA VAVLGLGALA LSVGLQGLDI
LDAPFAELGS AAVWWEGATG SFGRSAAIAA VAFGLTLSAL LGRGAPARLL SFGAVLGVGA
ALAASGHAAT AEPRWLATAA VLVHGVSLAL WVGALLPLAV MVGPNHATAN VTLRRFSRTI
PIAIATLLIS GVVLGAIQLG RIEALWTSDY GRILFAKLAL VVALLLIALW NRRRVTPLLA
AGTPHAAYAL RRTIAAELVL VIAILGLVGL WRFTPPPRAA TAAAAEDRAF AHLHTGRAMA
NVTLTPGHAG PIEIEVMLQT PDETPLQAQA LTVTLANPDA GIEPASAEAR RQPDGPWRVR
MSAPVPGRWS LTLGILISDF DKVTIAAPVV IR