| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1178 |
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| Symbol | |
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| ID | 3910113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1352116 |
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| End bp | 1352739 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637883072 |
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| Product | outer membrane protein |
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| Protein accession | YP_484799 |
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| Protein GI | 86748303 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.557551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0838188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTAAAC TTGCGATGGC CGCGGCGACC GTAATCGCCG CAACGGGGTC CACGGCACAG
GCGGCGGATA TGGGCTATTA CGGCTCACGG ACGCCCTACA CCGTGAATCA GCCCCTCAAC
GCCTTCAGCT GGGCCGGCCC GTATCTGGGC GGCAATCTCG GCTACGCGTT CGGCAACGTC
ACCAACAACA TCACCAAGCC GTCCGGATTC AGCGGTGGCG TTCAGGGCGG CTACAATTGG
CAGAGCGGCA ACATCGTCTT CGGCCTCGAA GGCGATATTC AGTTCTCGAC CGCCAACGAC
ACCTTCGCGT CCTACAAATT CTCGAACCCC TGGTTCGGGA CGGCACGCGG CCGCGTCGGC
TATGCGATGA ACGACATTCT GCTCTACGCA ACCGGCGGTC TCGCTTTCGG TCAGCTGAAG
GGCGAATATC TGCTGTCCTC GGAGAGCCAC ACCTCGGCCG GCTGGACGGT CGGCGCCGGC
GCCGAATTCG CCTTTGCGCC GAAGCTCAGC GCCAAGGTCG AGTATCTTTA CGGCAGCCTG
TCGACCAACA ACTTCTTCAT CACCGGCGCC CCGAACGGCT ACAATTTCGG CCTCATCCGC
GCCGGCATCA ACTATCATTT CTAA
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| Protein sequence | MRKLAMAAAT VIAATGSTAQ AADMGYYGSR TPYTVNQPLN AFSWAGPYLG GNLGYAFGNV
TNNITKPSGF SGGVQGGYNW QSGNIVFGLE GDIQFSTAND TFASYKFSNP WFGTARGRVG
YAMNDILLYA TGGLAFGQLK GEYLLSSESH TSAGWTVGAG AEFAFAPKLS AKVEYLYGSL
STNNFFITGA PNGYNFGLIR AGINYHF
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