Gene RPB_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1090 
Symbol 
ID3910176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1250928 
End bp1251725 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID637882983 
Productmethyltransferase small 
Protein accessionYP_484711 
Protein GI86748215 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.656005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC CTGCCGCGAC CACCGAGGAT GGCTTTCTCG GCGGGCGGTT GCGGCTGCGA 
CAACTGGTCC TCGGTCATCG GGCCGGCCAT GACGCCATCC TGCTGGCAGC GGCGACTAGA
GCGCGGCCGG GGGACCGAGT CGTCGAGTTC GGCGCCGGCG TCGGCGCGGC CGGGCTGGCG
TTGGCCGCCC GGGTCGGGGG CCTCGATCTG CTGCTGGTCG AGCGGGATCC ACAACTGGCC
GCGCTTGCGC GCGCAAACGC CGCAGCCAAC GGTATCCGGG CCGCGGCGGT GGTGCTGGAT
GTGGAGGCCG GTGCGGACGC CTTCGCGGCC GTCGACCTGT TGCCCGACAG CGTCGATGTC
GTGCTGATGA ATCCACCGTT CAACGATCCG TCGCGGCATC GCGGTTCGCC CGACGGCGCG
CGGCAGGCTG CGCATGTGGC GACCGCCACA ACTTTGGAGT CATGGGTGCA TGCTGCGCGA
CGCGTGCTGA AATCGGGCGG CGCCCTGACG CTGATCTGGC GCGCCGATGG CTTGGCCGAA
GTGCTGGCGG CGCTCGCCCG CGGCTTCGGC AGCCTGGCGT TGTTACCCGT CCACGGCAAA
CCGGACGAAC CGGCGATCCG GGTGCTGATC CGCGCGGTCA AAGGCGGACG TGCGCCGCTT
CAGATCCACG CGGCGGTCCA TTTGAACGAG GCATCGGGAA CACCGACCGC GCTCGCACGC
GCCGTCCTGA ACGGTGAGCA GATCCTGCCA CCCGCGGTCA CATCATCGCG AGCGCCGGGC
AAAAATTGCT CGGCCTGA
 
Protein sequence
MTDPAATTED GFLGGRLRLR QLVLGHRAGH DAILLAAATR ARPGDRVVEF GAGVGAAGLA 
LAARVGGLDL LLVERDPQLA ALARANAAAN GIRAAAVVLD VEAGADAFAA VDLLPDSVDV
VLMNPPFNDP SRHRGSPDGA RQAAHVATAT TLESWVHAAR RVLKSGGALT LIWRADGLAE
VLAALARGFG SLALLPVHGK PDEPAIRVLI RAVKGGRAPL QIHAAVHLNE ASGTPTALAR
AVLNGEQILP PAVTSSRAPG KNCSA