| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0097 |
|---|
| Symbol | |
|---|
| ID | 3909683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 105431 |
|---|
| End bp | 106054 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637881978 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_483720 |
|---|
| Protein GI | 86747224 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAC AGGCTAAAAC CAGCGACGAC CCGCGCCGCG CCGCGATTTT GCAGGCGGCT
TTCGACGTCT TCGTCGAAAA AGGCTTCGAG GCGGCGACCA CCGCCGAGAT CGTCCGCCGG
GCCAAGACCT CGAAGCGGAC GCTGTACGAA TTCTTCGCCA GCAAGCAGGA CATCCTGAGC
GCCCTGGTGC GCTACGGCAG CCAGAAGATG CAGCCCTCGC TCGATCTGCC GGCGCCGCAG
GATCGCGCGC AGTTCCTCGT CGTGCTCGAG CAGTTCGGGC AGCGCTTTCT CGGCGAATTG
CTGCATCCGG AGCGAACCGC GATGTATCGC CTCGCGATAG CCGAAGCCGG GCGCGGCGGC
GGCATGGTGG CGCGCGAACT CGACGCCAAC GGCCGGCAGC CGGTGATGCG GGCGGCGACG
CGGTTCTTCG ATCAGGCCGC GGCGCGCGGC ATCATCCGGG GCGACGACAT CGCAACGCTG
CTCAGCGTGT ATTTCTCGGT GCTGATCGGC TTCGCGCAAC TGCAGACGCT GCTCGGTGCC
GAACCGCCGT TCGACGCCGA GGCGATCGCC CAGCGGGCCG CGCTGGCGAC GCGTGCGACG
GAGCGGATGA TGCGGCCGGC GTAG
|
|---|
| Protein sequence | MNEQAKTSDD PRRAAILQAA FDVFVEKGFE AATTAEIVRR AKTSKRTLYE FFASKQDILS
ALVRYGSQKM QPSLDLPAPQ DRAQFLVVLE QFGQRFLGEL LHPERTAMYR LAIAEAGRGG
GMVARELDAN GRQPVMRAAT RFFDQAAARG IIRGDDIATL LSVYFSVLIG FAQLQTLLGA
EPPFDAEAIA QRAALATRAT ERMMRPA
|
|---|
| |