Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4504 |
Symbol | |
ID | 3907480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5376036 |
End bp | 5378465 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637881836 |
Product | UvrD/REP helicase |
Protein accession | YP_483579 |
Protein GI | 86743179 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTTTGG ATGGACCGGC AGCGCGCATC CCCGCCACCG CTGCGTCGAC CGCCGGCACG TCGACCGCCG GCACGTCGAC CGCCCATCCT CCGACGACCG CCTCGTCGAC GCGAGACGCC GACCCGCTGC CAGAACCGTC GGCCCTCGGT CAAGCCGTCC TGCTCGGGAT GGAGATCGAC GGAGTCCAGC GACAGATCCA GCACCTGACC GACGTGCTGA AGCAGTTACG CCGCCACCGC CAGCACTGGG AAGCCGGTGG CCGGGCCGAG CAGAGTGTGG TCCGAGTGCT GGTCGGTATG GACGACGCAG GGTGGCACGT GCTGCCGGAC CGACGGTGGC CAGGCACCCG CCGGGCCAAC ATCGACGTGA TCGTGGTGGG GCCTGGCGGA GTCTTCGTGG TAGACGTGAA GAACTGGCGA GAGATCACCG TCGAACGCGG CCGGTTATGG CGTGGCGACG CCGACGCGGA CGACGACGTC CGCAAACTTC TGGATCAGAC CGTAGCGGTG GAGGAGGTGC TGGTAGAGGC AGGTCTGCCA CCGACCGAGG TGGTTCCGCT GCTGGTTCTG GCCAGGCGGA AAAACGTCCG GGCACAACTC GACCGGGTGA CGGTGCTCGG CGAGCAGGAC CTGACCCGCG ACCTGGCGCG TCGTGGCGCA CGCCTGGCAC CGGACCTCGT TGAACAACTA CTGGACCGTC TGGCACGCGG TTGCCCGCCG ATGCCCCGCG CCGCCGCCGT CACCACCGTC ACGGTCGCCG AGGCGCCGAC CTCACGGTCT GTCCGCCGTC CGGTCGCGCG CCGGGCAGGT CCCTCTTCGA ACGGTACGGC CGCGACCGAA AGCCCAGCCG CTATCGAGCG GCCCACTCAG GCCTACTGTC CGGCTCCGGC CGGGCGTCCG ACTTCTTCCG AGCCGCTGTC GCCGCCCGAG CAATCGGTTC CACCAGATCA GGATGCGCTG CTGAGCCGCG AGGAGCTGTG GCAAGAACTT CTCGACGCCG CCGCCCGAGA GCCGATCGAG ACGTGGATGA CCTGGCTGCA CCCGACGCAG GCCCGCCTGG CCGGCCGGCA GTGGTCGGGT CCGGCCCGCG TCCGCGGCGC GGCCGGTACC GGCAAGACGG TTATCGCGTT GCACCGCGCC AAGTATCTGG CCGCCCGCGG GGAACGGGTG TTGTTCACCT CGCTGGTGCG TACGCTGGGG CCGGTCTACC GCGCACTGCT GACCCGGATG GCCCCCGAGC ACGTCGACCG GATCGAGTTC GCCACCGTCC ACGCCGTCGC CACACGTTGT CTTCGCGAAC ACGGCTTGGC AGACCGGCAC CAGCAGGAGG CCGCCGACAC CTGTTTCTGG CGCGCCTGGG GGCAGGTCGG GCAGTTCTCG GTTCTGCCCG GGCTCGGCCT GGCTCCCGGG TATTGGAAGG ACGAGATCGC GACAGTCGTC AAGGGCCGAG GCCTGACCGA CTTCGAGCAG TACGCCAAGC TGGCACGCGT CGGGCGCAGC ACTCCCTTGC AACCGACCCA CCGGCGTGCG GTGTGGGAGC TGTACGAACG GTACGAGCAG CTCCGGACAG AGCGCGGCGT CCTCGATCGC GACGACGTGC TGCTCCTGGC TCGCGACCTG GTGCGCGAGA GTTCCGACAC CCGGTACGAC GCGGTGATCG TTGACGAGGT ACAGGACCTG ACGTGCGTCG GTCTGCAACT GCTGCATGCC TTCGTCGGCG ACAAGCCGGA CGGCCTGCTC GTGGTCGGCG ATGGCCAGCA GTCCATCTAT CCCGGCGGTT TCACCCTCGC CGAGGCCGGC GTCGCCGTCG TCGGACGCTC CACCGTGCTC GGGAGAAACT ACCGTAATCG CGAGAAGATC CTGCGCTACG CTCAGGCGGT AGTCGCCGAC GACAGCTTCG ACGACCTCGA CGGCGTCCAG GAACGCGGGC GGCGCGAGGT CGACGTCGAC CGGCCGGGAG GCGAGATCCG CGAGGTCACG GTGTCGGGCA CCGTGGCGCA GGATGCGGCG CTCTGCGAGC ACCTCGTGGA GTTCCATGAC AATCGGAACG TCCGTTACGG CGATATGGCG GTGCTCGTGC CGACGAACGC CGCGGCTGCG CGGTGGCTGC GCGTCCTCAC CGAGCGGGGC ATTCCAGCGG TTTCCCTCAA GGAGTATGAC GGAACCAGCT GTGAGGCGGT CAAGGTCGGG ACGTACCACC GGGTCAAGAG CCTCGACTTC GCCCATGTCT GTATTCCCGA CCGCAACCTC TTCCCAAAGC CGCGGCGGCC GTCCGAATCG GCCGACGCGT TTCGCGAGCG AACCCAGTTG GAACGCCGAC AGATGTACGT GGCCATCACG AGGGCACGAG ACAGCGTGTG GGCCGGTATC CGCGAGGTAC CCGACTCGGA CCACTCGATC CCCGCCGAGA TCGGACACAG CTCCAGGTAG
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Protein sequence | MLLDGPAARI PATAASTAGT STAGTSTAHP PTTASSTRDA DPLPEPSALG QAVLLGMEID GVQRQIQHLT DVLKQLRRHR QHWEAGGRAE QSVVRVLVGM DDAGWHVLPD RRWPGTRRAN IDVIVVGPGG VFVVDVKNWR EITVERGRLW RGDADADDDV RKLLDQTVAV EEVLVEAGLP PTEVVPLLVL ARRKNVRAQL DRVTVLGEQD LTRDLARRGA RLAPDLVEQL LDRLARGCPP MPRAAAVTTV TVAEAPTSRS VRRPVARRAG PSSNGTAATE SPAAIERPTQ AYCPAPAGRP TSSEPLSPPE QSVPPDQDAL LSREELWQEL LDAAAREPIE TWMTWLHPTQ ARLAGRQWSG PARVRGAAGT GKTVIALHRA KYLAARGERV LFTSLVRTLG PVYRALLTRM APEHVDRIEF ATVHAVATRC LREHGLADRH QQEAADTCFW RAWGQVGQFS VLPGLGLAPG YWKDEIATVV KGRGLTDFEQ YAKLARVGRS TPLQPTHRRA VWELYERYEQ LRTERGVLDR DDVLLLARDL VRESSDTRYD AVIVDEVQDL TCVGLQLLHA FVGDKPDGLL VVGDGQQSIY PGGFTLAEAG VAVVGRSTVL GRNYRNREKI LRYAQAVVAD DSFDDLDGVQ ERGRREVDVD RPGGEIREVT VSGTVAQDAA LCEHLVEFHD NRNVRYGDMA VLVPTNAAAA RWLRVLTERG IPAVSLKEYD GTSCEAVKVG TYHRVKSLDF AHVCIPDRNL FPKPRRPSES ADAFRERTQL ERRQMYVAIT RARDSVWAGI REVPDSDHSI PAEIGHSSR
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