Gene Francci3_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4399 
Symbol 
ID3907374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5258992 
End bp5259540 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID637881730 
Producthypothetical protein 
Protein accessionYP_483474 
Protein GI86743074 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.722704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTC CCACCCCCCC GGTCACCGTG GAAGATCTCG ACACGGGCGG GCATGACGAC 
GCTCGGTTCG AACTCCTGGA CGGCTTGTGC GTCCTGCGAC CATGGCCGAC ACCGCTGCGG
GCCCGCGTCA CGGCGCGCCT GGTCCGGATC CTGGCGGACA CGGCCACCTC CGGAGCTCAT
ATCCTGCCGG CCGGGATCGG GGTGGAGCTG TCCCCCCGCA GTCTGCTCGT GCCGGACGTC
GTGGTGGCGG CGGCGAGTGG TGACACCGGC CGTCGGTTCC GGGACACCCC GTCCCTCGTC
ATCGAAGTGG CCGACGCCAG CACCCGGCGC TACAACCGCA CCCTCAAACT CGATCTCTAC
CGGCAACGCG GCGTGCCGTC CTGCTGGCTG ATCGACCCGG ACACCGCCAC CATCGAGGCG
TACGACCTGG TCGCCGACGC GTACCTCGCC ACCCGCACGG TCAGCGGGAA GGAGACCTTC
ACCGCCACCC AGCCCTTTCC GGTGGCGATC CAGCCGGCCG AGCTGATCGA CCCGCCCGAC
TCGGAGTGA
 
Protein sequence
MTVPTPPVTV EDLDTGGHDD ARFELLDGLC VLRPWPTPLR ARVTARLVRI LADTATSGAH 
ILPAGIGVEL SPRSLLVPDV VVAAASGDTG RRFRDTPSLV IEVADASTRR YNRTLKLDLY
RQRGVPSCWL IDPDTATIEA YDLVADAYLA TRTVSGKETF TATQPFPVAI QPAELIDPPD
SE