Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4399 |
Symbol | |
ID | 3907374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5258992 |
End bp | 5259540 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637881730 |
Product | hypothetical protein |
Protein accession | YP_483474 |
Protein GI | 86743074 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.722704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTTC CCACCCCCCC GGTCACCGTG GAAGATCTCG ACACGGGCGG GCATGACGAC GCTCGGTTCG AACTCCTGGA CGGCTTGTGC GTCCTGCGAC CATGGCCGAC ACCGCTGCGG GCCCGCGTCA CGGCGCGCCT GGTCCGGATC CTGGCGGACA CGGCCACCTC CGGAGCTCAT ATCCTGCCGG CCGGGATCGG GGTGGAGCTG TCCCCCCGCA GTCTGCTCGT GCCGGACGTC GTGGTGGCGG CGGCGAGTGG TGACACCGGC CGTCGGTTCC GGGACACCCC GTCCCTCGTC ATCGAAGTGG CCGACGCCAG CACCCGGCGC TACAACCGCA CCCTCAAACT CGATCTCTAC CGGCAACGCG GCGTGCCGTC CTGCTGGCTG ATCGACCCGG ACACCGCCAC CATCGAGGCG TACGACCTGG TCGCCGACGC GTACCTCGCC ACCCGCACGG TCAGCGGGAA GGAGACCTTC ACCGCCACCC AGCCCTTTCC GGTGGCGATC CAGCCGGCCG AGCTGATCGA CCCGCCCGAC TCGGAGTGA
|
Protein sequence | MTVPTPPVTV EDLDTGGHDD ARFELLDGLC VLRPWPTPLR ARVTARLVRI LADTATSGAH ILPAGIGVEL SPRSLLVPDV VVAAASGDTG RRFRDTPSLV IEVADASTRR YNRTLKLDLY RQRGVPSCWL IDPDTATIEA YDLVADAYLA TRTVSGKETF TATQPFPVAI QPAELIDPPD SE
|
| |