| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3857 |
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| Symbol | |
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| ID | 3906625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4621101 |
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| End bp | 4622402 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637881183 |
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| Product | N-succinyldiaminopimelate aminotransferase |
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| Protein accession | YP_482936 |
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| Protein GI | 86742536 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.947972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.24112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGAGCGGCC CTGGGAGACC CGGCAACATC TCCGGAGTCC CGCGGTCACC GGCCCGGTCC
CGGGTGCGAC TGCCCGACTT CCCGTGGGAC CAGCTGGTCT CCTTCAAGGA GAAGGCCCGG
CTGCATCCCT ATGGGTTGGT CGACCTCTCG GTGGGTACTC CGGTCGACGC CACGCCGGCC
GTCGTGCAGC AGGCGCTGGC CGGCTCCGCT GACGCTCCGG GGTACCCGCT GACCGCGGGT
ACCCCGGAGC TGCGCGAGGC GGCGGCCGGC TGGCTGGCCC GCCGGCTCGG CGTGCTCGTC
GACCCGGGCG CGGTGCTGCC CGTGCTCGGG ACGAAGGAAC TGGTGGCCCA GCTCCCCGGT
CAGCTCGGGC TCGAACCCGG TGACCGGGTG TGGGTGCCGA CCCCGGCCTA TCCAACCTAC
GAGGTCGGCG CGCTGCTCGC CCGCTGCGAA CCGGTGGCGG GCCCGGCCGA CGGGGTGACC
CTGATCTGGT TGAACTCGCC GGGGAACCCG ACCGGGCGGG TGCTCACGGT CGACGAGATG
CGCGCCGTGG TCACCTGGGC GCGGGAGCGC GGTGTGATCG TCGCCAGCGA CGAGTGCTAC
ATCGAGCTGG GCTGGGAGAG CCGGCCCGTC TCGGTGCTGC ACCCCGACGT GTGCGGCGGC
TCCCACGAGG GACTGCTGGC GGTGCATTCG CTGTCGAAGC GGTCCAACCT CGCGGGCTAC
CGGGCCGGGT TCGTCACCGG TGACCCGGCC CTGGTCGAGG GTCTCCTCGC GGTCCGCAAG
CACGCCGGCT TCATGATGCC GACGCCCGTG CAGGCCGCCA TGGCGGCTGC GTACGCCGAC
GACATGCATG TGGCGGATCA GCGGGCGCGC TACGCCAACC GGCGGGCCGT CCTCGCGGCG
GCGCTCGCGG TCGCGGGTTT CACCATCGAT CACAGCGAGG CCGGCCTCTA CCTGTGGGCA
ACCCGGGGTG AGGAGGCCTG GGCCACGGTG GACGCGCTGG CCGAGGTCGG GATACTCGTC
GCGCCCGGGA CGTTTTACGG GGAGGCTGGC CGGTATCACG TCCGGATCGC CCTGACCGCC
GCGGACTCGC AGGTGGCGAC TGTTCCCGAG CGGATGACGA TGCTGTCGCC GGTCGCCGCC
ACGGGGCAGC CCGGCCATGG CGCTCGGCCC GGCCATGGCG CTCGGCCCGG CCGTGGCGCT
CGGCCTGACC ATGGCGCTCG GCCCGGCCAT GGCGCTCGGC CCGACTACGG TCAGCCGGTC
ACTCAGGGCA GCTATGGGGG TGCCGAGCCG GACATCCGTT AG
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| Protein sequence | MSGPGRPGNI SGVPRSPARS RVRLPDFPWD QLVSFKEKAR LHPYGLVDLS VGTPVDATPA
VVQQALAGSA DAPGYPLTAG TPELREAAAG WLARRLGVLV DPGAVLPVLG TKELVAQLPG
QLGLEPGDRV WVPTPAYPTY EVGALLARCE PVAGPADGVT LIWLNSPGNP TGRVLTVDEM
RAVVTWARER GVIVASDECY IELGWESRPV SVLHPDVCGG SHEGLLAVHS LSKRSNLAGY
RAGFVTGDPA LVEGLLAVRK HAGFMMPTPV QAAMAAAYAD DMHVADQRAR YANRRAVLAA
ALAVAGFTID HSEAGLYLWA TRGEEAWATV DALAEVGILV APGTFYGEAG RYHVRIALTA
ADSQVATVPE RMTMLSPVAA TGQPGHGARP GHGARPGRGA RPDHGARPGH GARPDYGQPV
TQGSYGGAEP DIR
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