Gene Francci3_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3648 
Symbol 
ID3905329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4357884 
End bp4359014 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content72% 
IMG OID637880971 
Productmethionine synthase, vitamin-B12 independent 
Protein accessionYP_482729 
Protein GI86742329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.744365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTG ACGCTGCACG GATGTGGCCG CCCGGCGCGG CCACCGGGGT GGGCTCGCTG 
CCGGGAACGG ATGCGGCCCA GGCCGTCAAG CTGGTCTTCG ACGAGCTGCC GGACCTGCCG
CATCTGCCAG AACTGCCGGC CAGGGGAGCC GGGGGTGCGA TGGTCGGGCG GGCGGCGGCG
ATCCTCGTCG ACATGCCGGT GGACCTTCAG CCGGCTGGCT GGCGGCTGGT TCCCCGACCC
GGCCTGGACC TGCGCCGGTC ACGGGATCTG CTCGAACGCG ACCTGGACGC GCTGACGGAG
GTCGCCGCCG ACTACGCGGG ATCCTTCAAG ATTGCCGTGA CCGGCCCGTG GACGCTGGCT
GCCGAGCTGG AGCTTCCCCG CGGGCACAAG GCGTTGTCGG ATACCGGCGC CACCCGTGAC
ATCGCCGACG CACTGACCGC GGGGCTCGTC GGACAGGTCG AACAGATCGC CCAGCGGGTC
CCGGGGGCGC GGATCCTGGT CCAGCTCGAC GAGCCGTCGC TGCCGGCGGT GCTCGCGGGC
CGGATCCGCA CTCCGAGTGG GTTCTCGGTG CTGCCCGCCG TCGAGGAGGG CTTGGTTGTG
GAGCGGCTGC GGATCCTGCT CGGTGGCCTG CGGGCGCTGC CGGCGACCGT CGGAGTCGGG
GTGCACTGCT GCGCTCCCGC GGTGCCGCTG GCGGCGTTGC GCGCGGCGGG TGTGGACTTC
GTCGGTCTCG ACGTCACCGC GCTTACCCGG GCCGAGGACG ACGCCGTCGG CGAGATCGTG
GAGGCCGGAG TGCGGCTGAT GGCGGGCCTC GTCCCCACCA GGCCGATTTC ACCGGCCGCG
CCGATTTCAC CGACAGGACC GACAGGACCG ACAGGACCGA CTGGACCGAC CGCACCTGCT
GGTGCAGCCG GACGGGCTGT CTTGGCCGCA CCGAAGTTGT CGGATGTCCG CCGTACGGTC
GAACCCGTCA TCGCACTGTG GCGCCGGTTG GGATTCCGGC CCGAGCAGCT CGGAGAGGTG
GTCGCCGTGA CGCCGACATG TGGCCTGGCG GGCCTGGGAA CGGACGATGC CAGGACGGTG
ATGCGCCACT GCCGGAAGGC GGGGCGGGTC CTGGTCGACG CACCGTCGTG A
 
Protein sequence
MSTDAARMWP PGAATGVGSL PGTDAAQAVK LVFDELPDLP HLPELPARGA GGAMVGRAAA 
ILVDMPVDLQ PAGWRLVPRP GLDLRRSRDL LERDLDALTE VAADYAGSFK IAVTGPWTLA
AELELPRGHK ALSDTGATRD IADALTAGLV GQVEQIAQRV PGARILVQLD EPSLPAVLAG
RIRTPSGFSV LPAVEEGLVV ERLRILLGGL RALPATVGVG VHCCAPAVPL AALRAAGVDF
VGLDVTALTR AEDDAVGEIV EAGVRLMAGL VPTRPISPAA PISPTGPTGP TGPTGPTAPA
GAAGRAVLAA PKLSDVRRTV EPVIALWRRL GFRPEQLGEV VAVTPTCGLA GLGTDDARTV
MRHCRKAGRV LVDAPS