Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3648 |
Symbol | |
ID | 3905329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4357884 |
End bp | 4359014 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637880971 |
Product | methionine synthase, vitamin-B12 independent |
Protein accession | YP_482729 |
Protein GI | 86742329 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.744365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACTG ACGCTGCACG GATGTGGCCG CCCGGCGCGG CCACCGGGGT GGGCTCGCTG CCGGGAACGG ATGCGGCCCA GGCCGTCAAG CTGGTCTTCG ACGAGCTGCC GGACCTGCCG CATCTGCCAG AACTGCCGGC CAGGGGAGCC GGGGGTGCGA TGGTCGGGCG GGCGGCGGCG ATCCTCGTCG ACATGCCGGT GGACCTTCAG CCGGCTGGCT GGCGGCTGGT TCCCCGACCC GGCCTGGACC TGCGCCGGTC ACGGGATCTG CTCGAACGCG ACCTGGACGC GCTGACGGAG GTCGCCGCCG ACTACGCGGG ATCCTTCAAG ATTGCCGTGA CCGGCCCGTG GACGCTGGCT GCCGAGCTGG AGCTTCCCCG CGGGCACAAG GCGTTGTCGG ATACCGGCGC CACCCGTGAC ATCGCCGACG CACTGACCGC GGGGCTCGTC GGACAGGTCG AACAGATCGC CCAGCGGGTC CCGGGGGCGC GGATCCTGGT CCAGCTCGAC GAGCCGTCGC TGCCGGCGGT GCTCGCGGGC CGGATCCGCA CTCCGAGTGG GTTCTCGGTG CTGCCCGCCG TCGAGGAGGG CTTGGTTGTG GAGCGGCTGC GGATCCTGCT CGGTGGCCTG CGGGCGCTGC CGGCGACCGT CGGAGTCGGG GTGCACTGCT GCGCTCCCGC GGTGCCGCTG GCGGCGTTGC GCGCGGCGGG TGTGGACTTC GTCGGTCTCG ACGTCACCGC GCTTACCCGG GCCGAGGACG ACGCCGTCGG CGAGATCGTG GAGGCCGGAG TGCGGCTGAT GGCGGGCCTC GTCCCCACCA GGCCGATTTC ACCGGCCGCG CCGATTTCAC CGACAGGACC GACAGGACCG ACAGGACCGA CTGGACCGAC CGCACCTGCT GGTGCAGCCG GACGGGCTGT CTTGGCCGCA CCGAAGTTGT CGGATGTCCG CCGTACGGTC GAACCCGTCA TCGCACTGTG GCGCCGGTTG GGATTCCGGC CCGAGCAGCT CGGAGAGGTG GTCGCCGTGA CGCCGACATG TGGCCTGGCG GGCCTGGGAA CGGACGATGC CAGGACGGTG ATGCGCCACT GCCGGAAGGC GGGGCGGGTC CTGGTCGACG CACCGTCGTG A
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Protein sequence | MSTDAARMWP PGAATGVGSL PGTDAAQAVK LVFDELPDLP HLPELPARGA GGAMVGRAAA ILVDMPVDLQ PAGWRLVPRP GLDLRRSRDL LERDLDALTE VAADYAGSFK IAVTGPWTLA AELELPRGHK ALSDTGATRD IADALTAGLV GQVEQIAQRV PGARILVQLD EPSLPAVLAG RIRTPSGFSV LPAVEEGLVV ERLRILLGGL RALPATVGVG VHCCAPAVPL AALRAAGVDF VGLDVTALTR AEDDAVGEIV EAGVRLMAGL VPTRPISPAA PISPTGPTGP TGPTGPTAPA GAAGRAVLAA PKLSDVRRTV EPVIALWRRL GFRPEQLGEV VAVTPTCGLA GLGTDDARTV MRHCRKAGRV LVDAPS
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