Gene Francci3_3223 details

Gene Information

• Locus tag: Francci3_3223
• ID: 3906190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Frankia sp. CcI3
• Kingdom: Bacteria
• Replicon accession: NC_007777
• Strand: +
• Start bp: 3816760
• End bp: 3817506
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637880548
• Product: transposase
• Protein accession: YP_482309
• Protein GI: 86741909

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0327091
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.836815
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGTACTGGC GACCGGTCTT CCACATTCTC GAGGACGCGA TCGGTGAGTG CTGGCTGCTC 
AACGCCCGGC ACATGCACAA CGTCCCCGGC CGCAAGACGG ACGCGGCCGA CGCCGCGTGG 
ATCGCCGAAC TCGTCGAGTA CGGGCTGGTC CGCCCGTCGT TCGTGCCGCC GCAACCGATC 
CGCCAGCTGC GGGATCTGAC CCGCTACCGC AAGGCGCAGA TCGAGGAGCG GACCCGCGAG 
GTCCAGCGCC TGGACAAGGT TCTGCAGGAC GCGGGGATCA AGCTGTCGTC GGTGTCCTCG 
TCGATCCTGA CGGTGTCCGG CCGGGCGATC CTCGAGGCGA TGATCGCCGG TACCACCAAC 
CCGGAGGTAC TCTCCGAGCT CGCCCGCGGC CGGCTGCGCG CCAAGATCCC GGCGTTGCGG 
GAGGCGCTGA ACGGGTTCTT CACCGGCCAC CACGGTCTGA TCATCGGGGA GATCCTCGCG 
AAGCTGGACT ATCTCGATGA GGCGATCGAC CGGCTCTCGA CCGAGATCGA CCGGGTGATC 
GCCCCTTTCG AGGCGAAGGT CGACCTGCTG GACACGATCC CCGGGGTTGA CCGCCGCATG 
GCCGAATGCC TGCTCGCCGA GATCGGCCCG GACATGTCGG TCTTCCCGAC CGCCGGCCAC 
CTGGCTTCCT GGGCCGGGCG CTGCCCCGGC CAGCACGAGT CCGCCGGCAG GTCCAAGGGC 
GGCAAGACCC GCAAGGGCTC GAAGTAG 

 

Protein sequence

MYWRPVFHIL EDAIGECWLL NARHMHNVPG RKTDAADAAW IAELVEYGLV RPSFVPPQPI 
RQLRDLTRYR KAQIEERTRE VQRLDKVLQD AGIKLSSVSS SILTVSGRAI LEAMIAGTTN 
PEVLSELARG RLRAKIPALR EALNGFFTGH HGLIIGEILA KLDYLDEAID RLSTEIDRVI 
APFEAKVDLL DTIPGVDRRM AECLLAEIGP DMSVFPTAGH LASWAGRCPG QHESAGRSKG 
GKTRKGSK