Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2938 |
Symbol | |
ID | 3903753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3468126 |
End bp | 3468590 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637880259 |
Product | hypothetical protein |
Protein accession | YP_482025 |
Protein GI | 86741625 |
COG category | [S] Function unknown |
COG ID | [COG5500] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.418548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0599766 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTCGG CGCTGGTCGT GATCTCTCTC GTATTGACCG GGCTGGTGGC GGGCACGTTG ACGGTCGGCC TGGTCGCCGT ACGGCCCGCG ATGCATTCAC TGCCGCCCAC TCCCTACGTA ATGGTCAAGC AGGCGTTCGA CATCAGCTAC CCGCGGATGA TGAAGCTGCT GCAGATTACA AATCTGATCG CTACGATCGC CCTGGCGGTC GCGGCCGGCG TCACCGGTGC GACGGCCTGC GCGGTGCTGG CCGGCATCGT GGCGGCCTGC GTCCTCACCA ACATCCTGGT CACCGTGCGC GGCGACCTTC CGATCAACAA CGCCATGGCC ACCTGGCGGC CGGAGTCTCC GCCGGCCGAC TGGCGCGAGC AGCGGGCGCG CTGGGACTTC TTCAACAGCA TCCGCACGAC CGCCGCGGTG ATCGCGCTGG TTCTGCTGGC CCTGGCCGCG ACCACCCAGT ACTAA
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Protein sequence | MVSALVVISL VLTGLVAGTL TVGLVAVRPA MHSLPPTPYV MVKQAFDISY PRMMKLLQIT NLIATIALAV AAGVTGATAC AVLAGIVAAC VLTNILVTVR GDLPINNAMA TWRPESPPAD WREQRARWDF FNSIRTTAAV IALVLLALAA TTQY
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