Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2637 |
Symbol | |
ID | 3906310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3113535 |
End bp | 3114395 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637879962 |
Product | HAD family hydrolase |
Protein accession | YP_481728 |
Protein GI | 86741328 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.403398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.292856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGGAGCC TTGCGGCGGT TTTCTTCGAC ATGGATGGCC TGCTCGTTGA CACCGAGCCG ATTTGGACCA TCGCCGAGCA CGAGGCGGCG GCGCGGCTGG GCGGCGAGTT CACCCCGGCG ATGAAACGAG CCATGATCGG CCACGGCATC GACACCGCCG TGCCGCTCAT GGTGTCGATG CTCGGCCGGC CGGCGTCCGA CGTGGCGCCG ACGGCGGAGT TCCTGCTGCG CCGCTCCGCC GAGCTGTTCC GCGAGCCCGG TGCGATCGTC CCGCAGCCCG GGGCGGTGGA GCTGCTCGTC GCGCTGCGAG CGGCGGGTGT CCCGACCGCG CTGGTTTCCT CGTCCTTCCG CGACCTGATG GAGCCGGTGC TGCACGTCAT CGGTGACGAG TTCTTCGCCG TGACGGTCGC CGGCGATGAG GTCACTCGCC GCAAGCCGGA CCCGGAGCCC TACCTGACCG CCGCCCGGGT GCTCGGCGTC GACCCGGTTC GCTGCGTCGT CTTGGAGGAC AGCCCGTCGG GAGCGCGCGC CGGGGTGGCG GCCGGGTGCG CGACCATCAT GATCCCGTCC ATGCCGGATC TGCTCGACCT GGCCGCTTCG GGGGCTTCGG GGGCTTCGGG GGCTTCGGGG GCTTCGGGGG CCTCGGGGGC CTTGGAGGCC TTGGAGGCCT CGGGCGTCGC GGCTCGCGGC GAGCCGGTGC CCGCCGGGCT CGCGGCGCTC CTGGCGAGCC TGCACGACGT CACCCCGGAC CTCATGGAGT CCCTCACCAC CCCCCGCCTC AGCCCGCCCC TTCGCCCCAG CCGTCCTGGA TGCGAGGTTG GGGGAGTAAG GCACGGTTTT GGGGGCGAAG ACCGGGCGTA G
|
Protein sequence | MGSLAAVFFD MDGLLVDTEP IWTIAEHEAA ARLGGEFTPA MKRAMIGHGI DTAVPLMVSM LGRPASDVAP TAEFLLRRSA ELFREPGAIV PQPGAVELLV ALRAAGVPTA LVSSSFRDLM EPVLHVIGDE FFAVTVAGDE VTRRKPDPEP YLTAARVLGV DPVRCVVLED SPSGARAGVA AGCATIMIPS MPDLLDLAAS GASGASGASG ASGASGALEA LEASGVAARG EPVPAGLAAL LASLHDVTPD LMESLTTPRL SPPLRPSRPG CEVGGVRHGF GGEDRA
|
| |