Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2622 |
Symbol | |
ID | 3906295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3097084 |
End bp | 3097518 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637879947 |
Product | AraC family transcriptional regulator |
Protein accession | YP_481713 |
Protein GI | 86741313 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0868161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGAGCA GACCCGTCGC GGCGCGGCGC CTGATCGACC TCGCGCGGCT GCGCCGCGTC CGCGACCGGA TCGACCGGGA GTACGCGCGG CCGCTGGATG TCGAGGCGCT CGCCCGCGGC GCGCACATGT CGGCCGGGCA TCTCAGCCGC GAGTTCCGGC TCGCCTACGG CGAGTCGCCG TACGCCTATC TGATGGCGCG GCGCATCGAG CGCGCAATGG CGCTGCTGCG TCGTGGCGAC CTGAGTGTCA CCGAGGTCTG TTTCGCGGTC GGCTGCTCGT CGCTGGCCAC CGCCGCCCTC GACGGCACCT TCGCGCGGCT GCAGGCCAGC GGCGCCGAGG TCGTCCAGGA GCCGACCGAG CAGCCGTACG GCGTTCGCGA CTGCGCCTCC CGCGATCCCG CGGGCAACCT GATCCGCATC AACGAGCTCC GCTGA
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Protein sequence | MTSRPVAARR LIDLARLRRV RDRIDREYAR PLDVEALARG AHMSAGHLSR EFRLAYGESP YAYLMARRIE RAMALLRRGD LSVTEVCFAV GCSSLATAAL DGTFARLQAS GAEVVQEPTE QPYGVRDCAS RDPAGNLIRI NELR
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