| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1932 |
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| Symbol | |
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| ID | 3904294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2271821 |
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| End bp | 2273593 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637879269 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_481036 |
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| Protein GI | 86740636 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.333973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACATTC TGCGGGTGCC CGGAGGTACT GAGCTGCCCG CCGACCGAGG GCTGGCCGCC
GCCGTCCTTA CTGAGGTCGC CATGGTCGCC GACCGGCCGG TTCTGGCCCA TCAGGTGGAC
GGAGGCTGGC GCGATGTGAC CGCGGGCCGG TTCTGCTTCG ACGTCGCGGC CGTCGCCAGG
GGCCTGGTGG CGCACGACGT CGGGGTTGGC GACCGGGTTG CGATCATGGG TCGGACCGGT
TACGGCTGGG CCGTTGCCGA CTTCGCGATC TGGAGCATCG GCGCGGTCAC CGTCCCCGTC
TACCCGACCT CCTCGGCCCA CCAGGTCGAC CACATCATCG GTGACTCCAA GGCCTCGTGG
TGCTTCGTCG AGACACCCGA CCACGAGCGC CTGGTCCTGT CAGCGGGTCT TCCCGCGACG
CGCGTCTGGT CGCTGGACGA GGCCGTGTCG GCACTCGGCA CCGCCGGTCA GTCCGTCGCG
GAGTCCGAGG TGCTCCGCCG CCGGGACGCG GTCCGGGCCG ACGACCTCGC GACAATCGTC
TACACCAGCG GGACGACCGG CGTGCCGAAG GGCTGCCTGC TGACCCACGC GAACGTCTTC
TCCGCCGCCG TCAACTCGGT GGAGCGGCTG GACCCGGTGA TGCGTCCGGC CACCGGCTCG
GCCAGTACCA TTCTTTTCCT TCCGCTCTCG CACGTGTTCG GGCGTGTGAC CATGATCGGG
TGTCTGTGGG CCGGAGTGCG GACGGCCCTG CTGCCGGACC CCGGGGGCCT CGTCCCGGCG
CTGCGCACCT TCCGCCCCAC CTTCCTGATC ACCGTTCCGT CGGCGCTGGA GAAGATGCGC
AAGGGCGCGC GGGCGGCGGC GGCGGGCGGA CTCTCGGGGC GCCTGTTCGC CGCGGCCGAA
CGGACCGCCT GCGTGCTGGG TCGGGCCCGG CGTGGGCAGG GCGGCCTGGG GCTCGTCACG
CGGCTTCAGG CTCCGCTGTT CGACCGGCTG GTGTACCGCC GGTTGCGCGC GGCGTTCGGC
GGGCGCCTGC GCCACGTCGT GTGCGGGGGA GCGACGCTCG ACCCCTCCAC CGCCGAGTTC
CTCACCGGGG TCGGGGTGCA CGTCCTCGGC GCCTACGGGC TGACCGAGGC CTCGACGGCC
GTCAGCATCA GCGCTCCCGG GCTCGACCGG CCGGGCAGCA CGGGCCGTCC GCTGCCGGCG
ACCACCGTCG CGATCAGCGA CGAGGGCGAG GTCCTGGTGG CTGGGCCGCA GGTCTCGCCG
GGCTACTGGC CGGATCGGAC GGGCGCGCAC GAGCCGTGGT TGCGCACCGG TGACCTCGGT
CGGCTCGACG ACGACGGGTA TCTCCACATC ACCGGTCGAA TCAAGGAGAT CATTATCACC
ACCGGGGGGA AGAACGTCTC GCCGGCACCG CTGGAGGACC GCATCCGGCT GCACCCGCTG
GTCAGCAACG CCATAGTGAT CGGGGAGAAC CGGCCGTTCG TGACGGCCCT CGTGACCCTC
GATCGGGCCG CCGTGCAGGC CTGGGCCCGG CGAGGCGGTC ACAAGCTGGA CGAGGCCGCC
GCCCACACCG ACCCTCGGCT GGTCGCCGAG GTCAGCGCCG CGGTCGACGC GGCGAACGCG
CAGGTCTCGC GGGCCGAGTC GGTGCGGAAG TTCCGCCTCC TGAGCCACGA CTTCACCATC
CAGGGCGGCC AGCTCACCCC GTCGTTGAAG CTTCGCCGTG CCGTGATCGA GGAGGAGAAC
GCCAAGGAGA TCGAGGAGCT GTACGCGTCC TGA
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| Protein sequence | MNILRVPGGT ELPADRGLAA AVLTEVAMVA DRPVLAHQVD GGWRDVTAGR FCFDVAAVAR
GLVAHDVGVG DRVAIMGRTG YGWAVADFAI WSIGAVTVPV YPTSSAHQVD HIIGDSKASW
CFVETPDHER LVLSAGLPAT RVWSLDEAVS ALGTAGQSVA ESEVLRRRDA VRADDLATIV
YTSGTTGVPK GCLLTHANVF SAAVNSVERL DPVMRPATGS ASTILFLPLS HVFGRVTMIG
CLWAGVRTAL LPDPGGLVPA LRTFRPTFLI TVPSALEKMR KGARAAAAGG LSGRLFAAAE
RTACVLGRAR RGQGGLGLVT RLQAPLFDRL VYRRLRAAFG GRLRHVVCGG ATLDPSTAEF
LTGVGVHVLG AYGLTEASTA VSISAPGLDR PGSTGRPLPA TTVAISDEGE VLVAGPQVSP
GYWPDRTGAH EPWLRTGDLG RLDDDGYLHI TGRIKEIIIT TGGKNVSPAP LEDRIRLHPL
VSNAIVIGEN RPFVTALVTL DRAAVQAWAR RGGHKLDEAA AHTDPRLVAE VSAAVDAANA
QVSRAESVRK FRLLSHDFTI QGGQLTPSLK LRRAVIEEEN AKEIEELYAS
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