| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1580 |
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| Symbol | |
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| ID | 3903715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1894480 |
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| End bp | 1896276 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878917 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_480685 |
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| Protein GI | 86740285 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase
[COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.47169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCC CGGCCGGCCC GCGGCTCTCG GTGGTCATCT GTGCCTATAC CGAACGGCGC
CGGCACGATC TGCAGCGCGC GGTGACCAGC ATCGCCGAAC AGACCAGGAA GGCCGACCAG
CTGATCCTCG TCATCGACCA CAATGACCGG TTGCGCCGGT GGGCCGAGGC TGCGTACCCC
GGTGCCACCG TGATCCCCAA CACCGGCCGC CGTGGCCTGT CCGGTGCCCG CAACTGCGGC
GTCGGGGCCG CCACCGGCGA CGTGGTCGCC TTCCTGGACG ACGACGCCCA CGCCGAGCCG
GACTGGCTGG CCCAGTTGGC CGCCCACTAC ACCGACCCCC GGGTCGCCGG GGTCGGCGGT
GCCGCCATGC CGGTGTGGCC GCACCGCCGA CCCCGCTGGT TCCCCCCCGA GTTCGACTGG
GTGGTCGGAT GCAGCTACGT CGGGCTGCCG ACCGACACGG CTGCGGTCCG TAACCCGATC
GGAGCGGGGA TGTCGTTCCG GCGGGCCGTG TTCGATCGCG TCGGCGGGTT CACCGAGGGG
CTTGGGCGGG TCGGCACCAC ACCGCTGGGC TGCGAGGAAA CCGAGTTCGG TATCCGCCTT
CAGGCGATCC TCCCGGACGC TGTCGTCCGC TACGAGCCAC GGGCACGGGT CTGGCACCAG
GTAACCGGCG ACCGGGCCTC CCTGCGGTAC TTCCTGGCAC GCTGCCATGC CGAAGGCCTG
TCCAAGGCCG CGGTAGCCGA CCGGGCCGGG GCGGACGCGG CGCTCGCCAC CGAACGGCAG
TACCTGAGGC GGACGCTGCC CCGAGCACTG GCTCGTGACC GCCACAGCCT GGGCACCTGG
CCGCGAGCCG GGGCCGTGCT GGTCGGCACC GGGTCCACGG CCATCGGCTA CGCACGCGGC
CGGCTACGCC TCGCCGCCGG CCGGCGTGAC ACGCCACGTC AGCCGATCCC GTCGGAGGTA
GCTGTGATCC CGATTCTGCT GTACCACTCG GTGACCGATT ATCCGGTGGC GAGCTATCGA
CGTTGGACGG TCGATACCGC AACCTTTGTC CGCCATCTCA CCCTCATTGC CGGTTCCGGC
CGGGTACCGC TGACGGTGTC CGAGTATGTC GAACGGAGGC GGCACCAGAC CCTGCCTCCG
CGACCGGTCC TCATCACCTT CGACGACGGA TTCGCCGACA ACCTGGCCGC CGCTCGTGAG
GTCGTCGCGC ACGGGCTCAC CGCGACCTGC TACGTCGTCA CCGACTGGAT CGGCCAGGTC
GGCATGCTGC GCGGCGCCGA CCTGCGGACC CTGGCCGGCC TCGGGGTCGA GATCGGTGGT
CACAGCCACA CCCATCCCCG GCTCGACGAG CTTCGCCCCG ACGAGGCGCG CCGGGAGATC
AGCGACTGCA ACGCCCGGTT GACCGCTGCG ATCGGCGCAC CGGTGGGCTC CTTCGCCTAC
CCCCACGGCA ATTACGACCA TGCCGTTCGG CGGCTCGTCG GGCAGGCCGG CTTCACGTCC
GCCTGCGGGG TGCGCAACAT GATGTCGCAC GGCGCCGACG ACCCGTTCGC CCTTGCCCGA
CTGACCGTGA CGGTCGACAC CCCGGACCGG CAGATCAGGG CGTGGCTGGA CGGGGCCGGC
CGCGCGGCCC CCGCTCGGGA GTTGCTGCGT ACGCGGGGCA GCCGGCTCTC CCGTCGAACG
AGGGCTCGGC TCCTCGGCCC GCGTCTACCC TACCGACCAA TCGTCACCGA TCTGCCCGTA
CCAGCCGATC TGCCCGTACC AGCCGTCCCG GCGGCGTTCG GGGAGGTGCG GCCGTGA
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| Protein sequence | MTPPAGPRLS VVICAYTERR RHDLQRAVTS IAEQTRKADQ LILVIDHNDR LRRWAEAAYP
GATVIPNTGR RGLSGARNCG VGAATGDVVA FLDDDAHAEP DWLAQLAAHY TDPRVAGVGG
AAMPVWPHRR PRWFPPEFDW VVGCSYVGLP TDTAAVRNPI GAGMSFRRAV FDRVGGFTEG
LGRVGTTPLG CEETEFGIRL QAILPDAVVR YEPRARVWHQ VTGDRASLRY FLARCHAEGL
SKAAVADRAG ADAALATERQ YLRRTLPRAL ARDRHSLGTW PRAGAVLVGT GSTAIGYARG
RLRLAAGRRD TPRQPIPSEV AVIPILLYHS VTDYPVASYR RWTVDTATFV RHLTLIAGSG
RVPLTVSEYV ERRRHQTLPP RPVLITFDDG FADNLAAARE VVAHGLTATC YVVTDWIGQV
GMLRGADLRT LAGLGVEIGG HSHTHPRLDE LRPDEARREI SDCNARLTAA IGAPVGSFAY
PHGNYDHAVR RLVGQAGFTS ACGVRNMMSH GADDPFALAR LTVTVDTPDR QIRAWLDGAG
RAAPARELLR TRGSRLSRRT RARLLGPRLP YRPIVTDLPV PADLPVPAVP AAFGEVRP
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