| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1463 |
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| Symbol | |
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| ID | 3903100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1754940 |
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| End bp | 1757426 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637878801 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_480569 |
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| Protein GI | 86740169 |
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| COG category | [G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0300765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0105434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTG GCGAGGGCAC CCGGCTGCGT CCGTTGACCG CGAACCTGCC CAAACCACTG
CTCCCCGTCG TCAACCGGCC GATCATGGAG CATGTGCTGC GCCTACTCAA ACGGCACGGC
TTCGACGAGA CGGTGGTGAC CGTCCAGTTT CTGGCCTCGA TGATCCGGAC ATACTTCGGT
TCCGGTGACG AGCTCGGGAT GCACCTGTCG TACGCCACCG AGACGACCCC GCTGGGCACC
GCCGGCAGCG TGAAGAACGC CGAGGACGCC CTGCGGGACG AGGCGTTCCT GGTCATCAGC
GGGGACGCGC TGACCGACAT CGACCTCACC GACCTGGTTG CCTTCCACCG GCGTCAGGGC
GCGCTCGTCA CCGTCGCGCT GAAATCCGTC CCCGATCCGC TCGAGTTCGG CATCGTCATC
ACCGGCGAGG ACGGACGGAT CCAGCGCTTC CTGGAGAAGC CGACCTGGGG GCAGGTGTTC
TCCGACACCG TCAACACCGG CATCTACGTG ATGGAGCCCG AGGTGCTTGC CCAGGTGCCG
CCCGGCGAGG CGGTGGACTG GTCCGGCGAC ATCTTCCCCC GGCTGGTCGA GGCGGGTGCC
CCGGTGTACG GCTACGTGGC GTCCGGGTAC TGGGAGGACG TCGGCACCAT CGCGAGCTTC
CAACGGGCCC AGGCCGACGT GCTCAACCGC CAGGTCGACG TGGAGATCGG CGGTTTCGAG
GTGTCCCCCG GGGTGTGGAT CGGTGAGGAC GCCGAGGTCC ATCCGGAGGC GATCCTCAAG
GGGCCGCTCG TGGTCGGTGA CTACAGCAAG GTGGAGGCCG GCGCCGAGCT GCGGGAGTTT
TCCGTGCTGG GCAGCAACGT GCTGGTGAAG AGCGGCGCGT TCCTGCACCG GGCGATCGTC
CAGGACAACG CGCTCATCGG CCCGCAGACG AACCTGCGCG GCTGCGTCAT CGGCAAGAGC
ACCGACGTGC TGCGGGCGGC CAGGATCGAG GAGGGCGCCG TCGTCGGAGA CGAGTGCGTC
GTCCGCGAGG AGGCGTTCGT CTCCCATGAC GTGAAGGTGT ATCCGTTCAA GACGATCGAG
GCCGGCGCGG TCGTCAACAC CTCCGTCATC TGGGAGTCCC GCGGCCAGCG GACCCTGTTC
GGGCCGCGCG GGGTGTCCGG CCTGGTGAAC GCGGAGATCA CCCCGGAGCT GGTGGTGCGC
CTCGCCGGCG CCTACGCCAC GACCCTGAAG AAGGGGGCCA CCGTCACCAC CGCGCGGGAC
GGTTCCCGCG CCGCCCGGGC CCTCAAGCGG GCCGTCATCA GCGCGTTGAC CGCCGGCGCC
ATCAACGTCC GTGATCTCGA GGTGGCACCG ATGCCGGTCA CCCGCTTCGA CGTCCGCTCG
TCCAACGCCG CCGGGGGGAT CATGCTGCGC ACCACCCCCG GAGACCCGGA ACGCATCGAC
ATCATCTTCC TGGATGCCGA CGGCGACGAC CTCTCCCCGG TGGCACAGCG CAAGCTAGAC
CGGGTCTTCT CCCGCCAGGA GTTCCGCCGG GCCTTTCCCG GTGAGATCGG TGACCTGCGT
TTCCCGGCCC GTACCATGGA TCTCTACATC CAGGATCTGC TCGACCGGGT CGATACCGCC
GGCGTCGCCG AGGCGGATCT CAAGATCGTC GTTGATTCCT CGGGTGGCTC GGCGTCCCTG
GTGCTGCCGA CACTGCTCGG CCGGCTCGGC GTTGACGTGC TCACCGTCAA CGGACGCGTT
GACGAGACCA TCCCGCCCCG CAGCGCCCTG GAGGATCTGC GGGCCACCGA CCGCCTGGGC
GCCCTCGTCG CCAGCTCCGG GGCGGCCTTC GGCGTGCGGT TCGATCATGT CGGCGAGCGC
GTCACGATCG TTGACGAGCG GGGGGACCTT ATCGACGATG ACCGGGCCCT GCTGGTGTTC
CTCGACCTCG TCGCGGCGGA GAATCCCGGC GCGGAGGTAG CCCTCCCGGT GACCATCACC
CGGGTAGCCG ACCAGGTCAC CCGCTTCCAC GGGCTGACGG TACGCCGGAC CTCCCTGTCG
GCGGCGGCGC TGACCGGGGT CGCCCGTGAC GACGGCATCG TCTTCGCCGC CGACGGGCGG
GGCGGCTTCA TCGTCCCCGA GTTCGCCCCC GCGATCGACG GGATCGCGGC GTTCGTGAAA
CTGCTGGCCC TGGTGGCACG GACCCGGCTG ACACTCAGCA CCATCGACGC CCGGATACCT
TCGGTGGCGA TCCTGCGCCG TTCAGTGCCC ACCCCGTGGG CGGTCAAGGG CACCGTCATG
CGTCGCGTGG TGGAGTCGGT CGACCCGGAT ACGGGGTATG TCATCGACAC CACGGACGGG
GTTCGGATCG TCGGTCCGGA CGGCTCCTGG ATCCTGGTGT TGCCTGACCC GAGCGAGGCG
GTCACCCACC TGTGGTCGGA GGGCGCCGAC ATCGAGGAGG CCCACGTGCT GCTGCGGCGC
TGGGTCGAGG TGGTCGAGGC GCGGTAG
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| Protein sequence | MAGGEGTRLR PLTANLPKPL LPVVNRPIME HVLRLLKRHG FDETVVTVQF LASMIRTYFG
SGDELGMHLS YATETTPLGT AGSVKNAEDA LRDEAFLVIS GDALTDIDLT DLVAFHRRQG
ALVTVALKSV PDPLEFGIVI TGEDGRIQRF LEKPTWGQVF SDTVNTGIYV MEPEVLAQVP
PGEAVDWSGD IFPRLVEAGA PVYGYVASGY WEDVGTIASF QRAQADVLNR QVDVEIGGFE
VSPGVWIGED AEVHPEAILK GPLVVGDYSK VEAGAELREF SVLGSNVLVK SGAFLHRAIV
QDNALIGPQT NLRGCVIGKS TDVLRAARIE EGAVVGDECV VREEAFVSHD VKVYPFKTIE
AGAVVNTSVI WESRGQRTLF GPRGVSGLVN AEITPELVVR LAGAYATTLK KGATVTTARD
GSRAARALKR AVISALTAGA INVRDLEVAP MPVTRFDVRS SNAAGGIMLR TTPGDPERID
IIFLDADGDD LSPVAQRKLD RVFSRQEFRR AFPGEIGDLR FPARTMDLYI QDLLDRVDTA
GVAEADLKIV VDSSGGSASL VLPTLLGRLG VDVLTVNGRV DETIPPRSAL EDLRATDRLG
ALVASSGAAF GVRFDHVGER VTIVDERGDL IDDDRALLVF LDLVAAENPG AEVALPVTIT
RVADQVTRFH GLTVRRTSLS AAALTGVARD DGIVFAADGR GGFIVPEFAP AIDGIAAFVK
LLALVARTRL TLSTIDARIP SVAILRRSVP TPWAVKGTVM RRVVESVDPD TGYVIDTTDG
VRIVGPDGSW ILVLPDPSEA VTHLWSEGAD IEEAHVLLRR WVEVVEAR
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