| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0802 |
|---|
| Symbol | |
|---|
| ID | 3905738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 933582 |
|---|
| End bp | 935015 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637878135 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_479915 |
|---|
| Protein GI | 86739515 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCT CCGACGGCGA CCGGCTGGCG CAGTTCGAGG CCCTGCTGAG CGCCCAGGGT
AAGGCGGTGC TGGCGGCGGC GGTCGCGGCA TTTGCCGAGG ATGAGCGTGC CGGTGGAGGC
GCGGCCCGGG AACTGGCTGT CGGTGCCCGC CTGCGCGCCG AGGGCGTGTC CCCCGCGCTC
CTCGCCGCCG CGTTCACTCA GGCGGAGCTG AGGCGGCGCG CGATGGTCAA GTTTGCTCGG
GCCGATCGGA TGTTCTTCAC CCGAGCCGGG TTGGAACAAG CGTCCTCGCA GGCGGCGGCC
GAGCATCGGG CCGCGCGGTT CGCCGGTCTG TGCCGGCTCG CCGACCTGTG CACGGGGATC
GGCGGGGACG CGTTGGCCCT CGCGCGGGGC CGGGAGATCA TGCTCGTCGA CCGGGATCCG
GTTCATCTGC GGATGGCCGC GCTCAACGTC GCCGTCCACG CGGTCGAGGG CACGACGGTG
CTGCCCACGA CGGTGCTGCC CACGACCGCG CCGCCCACGG GATCGACCGT GCCGACGGGA
TGCCTCGAGA CGCGCCTGTC CGACGTGCGG GAGGTGGACC TCTCCGGATG CGACGCCGTG
TTCGTCGATC CGGCCCGGCG TGCCGGCGAC CGTCGGTTGG TGTCGCGGGC GAGCGAGCCG
CCGCTGGCCT GGTGCTTCGG GCTTGCCGAC AAGGTTGCGG CCGTCGCGGT GAAGGCCGCG
CCAGGGCTGG CGACGGAGCT GGTTCCCCCC GGCTGGGAGA TCGAGTTCGT GGCCGACGGA
CGGGATCTCA AGGAGGCCGT ACTGTTTTCA CCGGCCCTCG CGACCGCCCC GCGTCGCGCC
ACTGTGCTGC CCGGGCCGGG CGGCTCGGCG TCCCTGCGGG CCAGGGGAGC GCCGGTGAGC
CTCACCGGGA CCCCGGATCC AGTCGTCCCG GCGGATACAG GTCGGGCGGG TCGGGTGGGT
CGGGTGGGTC GGGTCGGCGA GCTAGCCGGT CGGGTAGCGG CTCCGGGCCG GTTCCTCCAC
GATCCGAGCC CGGCGGTCAC TCGGGCGGGC CTGATCGGCG AGCTCGGGCG GCGCCTCGGA
GCCTGGCAGA TTGATCCGAT GATCGCCTTC CTGACCTCCG ACGAGGCAGT GACGACCCCC
TTCGCCCGCC TGCTGTGCAT CGAGGCCGAG CTGCCCTTCG ACGTGCGCCG GATCGCGGAC
CTGTTGCGGT CTCGTGAGAT CGGGTCGCTG GACGTCCGGC GACGCGGTCT CGCCGGCGAC
GTCGAGGAGA TCCGTCGCCG GTTGCTACCC CGCCGTCGTG ATCTGATTCC CGGTGGACCG
GCCGTCACCG TGGTGATGAC GAGGCTGCGT GGAGCTCCCT GGGCCTTCGT CTGCACCCCG
GTATCGGATG TCGGGGGTAT CGGATGTCGG GGCGGTGGCG ACCGACTCTC ATGA
|
|---|
| Protein sequence | MTASDGDRLA QFEALLSAQG KAVLAAAVAA FAEDERAGGG AARELAVGAR LRAEGVSPAL
LAAAFTQAEL RRRAMVKFAR ADRMFFTRAG LEQASSQAAA EHRAARFAGL CRLADLCTGI
GGDALALARG REIMLVDRDP VHLRMAALNV AVHAVEGTTV LPTTVLPTTA PPTGSTVPTG
CLETRLSDVR EVDLSGCDAV FVDPARRAGD RRLVSRASEP PLAWCFGLAD KVAAVAVKAA
PGLATELVPP GWEIEFVADG RDLKEAVLFS PALATAPRRA TVLPGPGGSA SLRARGAPVS
LTGTPDPVVP ADTGRAGRVG RVGRVGELAG RVAAPGRFLH DPSPAVTRAG LIGELGRRLG
AWQIDPMIAF LTSDEAVTTP FARLLCIEAE LPFDVRRIAD LLRSREIGSL DVRRRGLAGD
VEEIRRRLLP RRRDLIPGGP AVTVVMTRLR GAPWAFVCTP VSDVGGIGCR GGGDRLS
|
|---|
| |