Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0738 |
Symbol | |
ID | 3905865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 853675 |
End bp | 854976 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637878071 |
Product | DNA polymerase III beta subunit family protein |
Protein accession | YP_479851 |
Protein GI | 86739451 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.911699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTTCA GCGTGGAACG CGACGCGTTC GCCGACGCGA CCGGCTGGGC CGCTCGGCAT CTGCCCAACC GGCCGGGCCC GGCCCGGAAC GTCCTGACCG GCATCCTGCT CGCCGCGGGC CATGGCTCCC CGGCGTCTCC CGGTTCCGCG GCGGTTCCCC TGCCGTCGGG CTCCGCGGCG TCTCCCGGTT CCGCGGCGGT TCCCCTGCCG TCGGGCTCCG CGGCGTCTCC CGGTTCCGCG GCGCCCCTGG GGGCGGCCAC GGCCTCGGTC CTGACGATCT GCGCGTACGA CACGGAGGTG GCGGTGCGGG CTCCGGTCGC GGCCTCGGTG GACGAACCGG GGCGGGTGCT GGTGCCCGGC CGGCTCCTCA CGGACATCGT GCGCAGCCTG CCCGCGACGA CGGTCGACGT CGTGGTCGAC GGTGACCGGC TGGTCCTGCG CTGCGGCAGC GTCCGTTTCA CCGTGCCGCT GATGGACCCG GGTGAGTACC CGCAGCTCCC TAGCTTTCCC GGACCGATCG GCGAGGTGGA CACGCTTGGG TTCGCGTCCG CGGTCGGTCA GGTCGCCCCG GCGGCAGGCC GGGACGAGAC CATGCCCGTG CTCACCGCGG TCCGGATGGA GATCTCCGGG CGTGGGCTGG CCCTCGTCGC CACCGACCGG TACCGGCTCG CGGTACGCGG CATACCCTGG CAGCCGACAG TCGACGATCC GTGGGCGCTC GCGCACGTGC CTGCCAAGGT TCTCGCCGAG GTGGCCCGCA CGCCGACGTC GGCCTCCCGC ATCGTGATTG GTCTGGACCT CGACGATCCG TCCGGCGCCC GGCTCGGCCT CGCCGCCGGC GGCCGGCAGA CCATCGTCCG GCTCATCGAA GGGACGTTTC CCAACTACCG CAAGCTCCTG CCCGAGGCGG CCGCGCTCGT CGTCACCGCG CAGACCGCGG CGCTCGCCGC GGCGGTCCGT CGGGTGGCCG TCGTCGCCAC CCGCACCGGG CCGCTGCGGT TCACTTTCAC CCACAACCAG GTCGTCGCCG AGGCCGGGGA CGGTGGTGGC GCACAGGCCA GCGAGACGAT TCCGGTCGAG TACGCAGGTC CCGAGCTCTC GGTGCTGTTC AATCCGTCCT ACCTGCTGGA CGGGCTCGGT GCCGTCGAGG ACGATCAGGC GACGATCGGG TTCGTTGACG ACGATCCGGT CGAGGCCGCC GCGAAACCCG CGGTGCTCAC CGGCAAGGAC AGCGGCCGCG GCGCTGTCGA CGAGGGCGCC TACCGCTACC TACTGATGCC GATCCGCCAC GGCGGGGGCT GA
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Protein sequence | MRFSVERDAF ADATGWAARH LPNRPGPARN VLTGILLAAG HGSPASPGSA AVPLPSGSAA SPGSAAVPLP SGSAASPGSA APLGAATASV LTICAYDTEV AVRAPVAASV DEPGRVLVPG RLLTDIVRSL PATTVDVVVD GDRLVLRCGS VRFTVPLMDP GEYPQLPSFP GPIGEVDTLG FASAVGQVAP AAGRDETMPV LTAVRMEISG RGLALVATDR YRLAVRGIPW QPTVDDPWAL AHVPAKVLAE VARTPTSASR IVIGLDLDDP SGARLGLAAG GRQTIVRLIE GTFPNYRKLL PEAAALVVTA QTAALAAAVR RVAVVATRTG PLRFTFTHNQ VVAEAGDGGG AQASETIPVE YAGPELSVLF NPSYLLDGLG AVEDDQATIG FVDDDPVEAA AKPAVLTGKD SGRGAVDEGA YRYLLMPIRH GGG
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