Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0735 |
Symbol | |
ID | 3905862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 850033 |
End bp | 851163 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637878068 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_479848 |
Protein GI | 86739448 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.605031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGACCCC GGGTGCTCGT CGACGCCACT TCGGTCCCGG CCGACCGTGG TGGCGTAGGG CGTTATGTCG ACGGGTTGGT CGCGGCGCTG GGCGCGACCG GCGCGGACAT GGCGCTCGTC TGCCAACGGT CGGATGAGGA ACGCTACAGC CGGATGGCCC CACACGCCAC CGTTCTGTCC GGGCCGGCGG CCATCGCCCA CCGGCCCGCG CGGTTGGCCT GGGAACAGAC CGGGCTGCCA CTGGTCGCCG AACAGGTGAA TGCCGATGTC ATCCATTCAC CGCACTACAC GATGCCGTTG CGGGCGCACC AGCCCGTGTG CGTGACGATT CACGATGTCA CCTTCTTCAC CGAGCCCGAC ATGCACACCG CGGTGAAGGG CACGTTCTTC CGGTCCGCGA TGCGCACCGC GGTGCGCCGG GCGGCCCGGA TCATCGTCCC CTCGAAGGCC ACCCGGGACG AGTTGGTGCG GGTGCTCGAC GGGGAGTCGA CGACCACCGA CGTCGCCTAC CACGGCGTCG ACACGTCGAC CTTCCATCCG CCGACCGAGG AGGACAAGCG GCGGGTGCGC CGCCGGCTCG GGCTCGGCGA CTCGCGCTAC GTCGCGTTCC TCGGGATGCT GGAGCCGCGC AAGAACGTGC CGAACCTCAT CCGGGGCTGG GCCGAGGCGG TGCACTGGCG GGACGAGCCG CCCGCGCTCG TCCTGGCCGG CGGCTCCGGC TGGGACGACG ACGTCGATGC CGCCGTCGCC TCGGTGCCGA GCCACCTGCG GGTGATCCGG CCGGGTTATC TGCGCTTCTC CGACCTGCCG GGCTATCTGG GAGGTTCGTC ACTGGTGGCG TATCCCTCGC ACGGTGAGGG CTTCGGGCTG CCGGTGCTGG AGGCGATGGC CTGCGGCGCC CCGGTTCTCA CCACGCCGCG TCTGTCGCTG CCGGAAGTCG GCGGCGACGC CGTCGCCTAC ACTCAGCCGG ACGCCGGCTC GATCGCCCGG GAGATGGGCG CCCTGCTCGA TGACGCCGAG CGGCGCAGGC AACTCGGTGA GGCCGGTCTC GCCCGGGCCC GGGAGTTCAC CTGGGCGGCC AGCGCCGAGG CGCATCTCGC GAGCTACGCG CGGGCGGTCG CCGAGCACTG A
|
Protein sequence | MGPRVLVDAT SVPADRGGVG RYVDGLVAAL GATGADMALV CQRSDEERYS RMAPHATVLS GPAAIAHRPA RLAWEQTGLP LVAEQVNADV IHSPHYTMPL RAHQPVCVTI HDVTFFTEPD MHTAVKGTFF RSAMRTAVRR AARIIVPSKA TRDELVRVLD GESTTTDVAY HGVDTSTFHP PTEEDKRRVR RRLGLGDSRY VAFLGMLEPR KNVPNLIRGW AEAVHWRDEP PALVLAGGSG WDDDVDAAVA SVPSHLRVIR PGYLRFSDLP GYLGGSSLVA YPSHGEGFGL PVLEAMACGA PVLTTPRLSL PEVGGDAVAY TQPDAGSIAR EMGALLDDAE RRRQLGEAGL ARAREFTWAA SAEAHLASYA RAVAEH
|
| |