Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0400 |
Symbol | |
ID | 3903642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 472130 |
End bp | 472741 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637877729 |
Product | putative signal transduction histidine kinase |
Protein accession | YP_479516 |
Protein GI | 86739116 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGGTG ACTCATCGCC TGTGATCCGG GTGGCCGTGG CGCACTTCCC GCCGACAGCC GCCGCCGTTC CCGACGTGCG CACGAGCACG GCCTGCACGC TCAGGGAATG GTCAGTCGAC TCCGACACCG TCAACACTGT CGAACTCGTC GTTTGTGAAT TGACCTCGAA TGCCGTGAAG GCGAGCCGCC CGGAAGACGT CGTGGCCATA CGGCTCACCG CGACAGGAGA ATACGTCCTT GTTGAAGTGC GGGACGGCAA TGACACCGCT CCCCGTATCA AAAGCCCGGA CCTGTTCAGT GAGGACGGAC GCGGCCTGCT GATGGTCGAC GCGCTGTCGC GCCGATGGTC GTGGTGGAGA GTAAAGACCG GCGGAAAAGT TGTCTGGGCC GAGATTCCCG GTGGTTTGCA AGCCACGCCG CCGCCGACGC AGGCCGCTAC GCCGATGCCG ACGCGGACAC CGAGGGTCGG GCCGCAGCCT ACGGCGCCGG TCGTCTACCG CACCGACCCG GAGACCCTGC GGCGGGTCGC TGACGCGCTG CGCGCGCTGG ACCCGTGGCA CCGGACCCCC TCCGGCCGCA GCTTGCCCGA AGCTGTGCCG CACCGGGCCT GA
|
Protein sequence | MTGDSSPVIR VAVAHFPPTA AAVPDVRTST ACTLREWSVD SDTVNTVELV VCELTSNAVK ASRPEDVVAI RLTATGEYVL VEVRDGNDTA PRIKSPDLFS EDGRGLLMVD ALSRRWSWWR VKTGGKVVWA EIPGGLQATP PPTQAATPMP TRTPRVGPQP TAPVVYRTDP ETLRRVADAL RALDPWHRTP SGRSLPEAVP HRA
|
| |