| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0233 |
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| Symbol | |
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| ID | 3906537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 272851 |
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| End bp | 273732 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637877562 |
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| Product | ApbE-like lipoprotein |
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| Protein accession | YP_479351 |
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| Protein GI | 86738951 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.91543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTAGCC TGCCGGTGTC GGGCGGGCCG GTGCCGGTTC GGCCCGGACG GGTCCGCGCC
GAACCGGTGA TGGGCACCGT CGTCAGCATC GACGTCCGCA CCCCGCTCGC CCCAGCGGAT
CTGGCGGCGG CGATCGAGGC GGCGGCTGCG GTCCTGCACC GGGCGGACGA GGATTTCAGC
ACGTTCCTGC CCGGGTCCTG GGTCTCTCGA ATCCGGCGCG GCGAGGTCGA CCTCGGTGCC
TGTCCCGACC ACGTCCGCGA GGTCTACCGG GTGGCCCGCG CCTGCCGGGA GCGGACCGGC
GGCAGGTTCG ACCCGGCGTG GCGGGGCGAC GGCACGCTGG ACCCCACCGG TCTGGTCAAG
GGCTGGGCGG CCGAGGCGGC CTCCCGGGTG CTGACTGACG CCGGAGCCGC GGACCACTGC
GTCAATGCGG CGGGGGACCT GCGGGCCAGG GGAGTCGCCT CGGCGCCGGG GCGACCCTGG
CGGGTGGGGG TGTCGGATCC CTTCGACCGG AGCCGACTCG TCGCGGTGGT CGAGGGCACC
GAGCTGGCCG TCGCCACCTC GGGGGTGTTG GAGCGGGGCG CGCACGTGAT CGACCCGCGC
ACCGGCATCC CGGCGACCGA GCTCGTCGCG GTCACCCTCG TTGGACCGGA CCTCACCCTG
GCGGACGCCT ACGCCACGGC CGCCCTCGCC GCCGGCCGGG ACGCGTGGAC CCTGCTTGTC
GATCTTGCTC GGGAGGGATG GGCCTGGCTG ATCGTCGACG CCGTCGGTCG GCTGGACCAT
TCGGGGGGAT TCCCCGGCCA GGTGGCCGCC GCCGCGTCCG CACCCCCCGC ATCACCCCCC
GCATCGGACG GGTCCCGTTC CGCGTCCGCC GGATCCCGAT GA
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| Protein sequence | MPSLPVSGGP VPVRPGRVRA EPVMGTVVSI DVRTPLAPAD LAAAIEAAAA VLHRADEDFS
TFLPGSWVSR IRRGEVDLGA CPDHVREVYR VARACRERTG GRFDPAWRGD GTLDPTGLVK
GWAAEAASRV LTDAGAADHC VNAAGDLRAR GVASAPGRPW RVGVSDPFDR SRLVAVVEGT
ELAVATSGVL ERGAHVIDPR TGIPATELVA VTLVGPDLTL ADAYATAALA AGRDAWTLLV
DLAREGWAWL IVDAVGRLDH SGGFPGQVAA AASAPPASPP ASDGSRSASA GSR
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