Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0222 |
Symbol | |
ID | 3905389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 260173 |
End bp | 261099 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637877551 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_479340 |
Protein GI | 86738940 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.267301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCAC CCGCCCGACG AACCGAACGG CAGAGACCTG GGATGGATGA CGAAGCACCG GCCTGGTTCG AGGCCGCCCT TGACCACCGA CCGGAGCGGC ACGAGACCGA GGTGGCGGGC GCGACTATCA GTTACCGCTG CTGGGGCAGG GGCGGCCGGC CGGCGATCGT GCTGGTCCAC GGTGGTGCCG CCCACGCGGG CTGGTGGGAC CACATCGCGC CGATGATTCC GCGGGAGTAC CGCGTCATCG CACTGGATCT GTCCGGCCAC GGTGACAGCG ACCGGCGCGA GGACTACTCG CTCAGTACCT GGGCGGCCGA GGTGATCGGT GTCATCGACC ACGCCAAGGT CGCCTCGCCC CCGATCATCA TCGGGCACAG CATGGGCGGC TGGGTGACGA TCACCACCGC AGCCCAGTAC CCGGACCGGG TCGCCGGCAT CGTCGTCGTC GACTCCCCCG TGCAGGAGTT CACCCCGGAG GAACGGGCGG CCCGGGACCG GACGGCGTTC GGCCCGCTGC GGGTGTATCC GACAGCGACC GACGCGCTGG CCCGGTTCCG GGCGGTGCCG GAGCAGCCCT ACGTGCTGCC GTTCATCATC GATCACGTCG CCCGGGGTTC GATCGGGTCG GTCCAGGGCG GCTGGACGTG GAAGTTCGAC CCGAAGGTGT TCGGCAACCG GACCCCGTCG CCCGAGGTAC TACGCAAGGT GCACTGCCGG GTCGCGCTCT TTCGGGCCGA GAAGGGCCTG CTCACCCCCG ACATCGGTGT CCAGATGTAC AACCTGCTCG GGCGGGTGGC ACCGGTGATC GAGATCCCGC TCGCCGGCCA TCACGTCATG CTCGATCAGC CGTTGCTACT GGTCACCGGG ATCCGGACGA TCCTCGCCGA CTGGGAGCAC TCCTCCCCGC AGGAACGGGT GGACTGA
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Protein sequence | MEPPARRTER QRPGMDDEAP AWFEAALDHR PERHETEVAG ATISYRCWGR GGRPAIVLVH GGAAHAGWWD HIAPMIPREY RVIALDLSGH GDSDRREDYS LSTWAAEVIG VIDHAKVASP PIIIGHSMGG WVTITTAAQY PDRVAGIVVV DSPVQEFTPE ERAARDRTAF GPLRVYPTAT DALARFRAVP EQPYVLPFII DHVARGSIGS VQGGWTWKFD PKVFGNRTPS PEVLRKVHCR VALFRAEKGL LTPDIGVQMY NLLGRVAPVI EIPLAGHHVM LDQPLLLVTG IRTILADWEH SSPQERVD
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