Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0095 |
Symbol | |
ID | 3902928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 117015 |
End bp | 118124 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637877425 |
Product | phosphoribosylaminoimidazole synthetase |
Protein accession | YP_479218 |
Protein GI | 86738818 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.605031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTG GATTGAACTC GTACCGGGCG GCCGGGGTCA ACGTGGCCGC GGGCGAGCGT GCCGTCGAGC TGATGCGCGG TCACGTCGCG CGCGCGATCC GGCCCGAGGT CGTCGGTTCG CTCGGCGGAT TCGCCGGCCT GTTCGCGCTG GATACGGCGC GGTACCGTCG GCCGCTGCTC GCCTCGTCGA CCGACGGTGT GGGCACCAAG ATTGCCGTTG CCCGGGCCCT GGACACGCAC GACACCGTGG GCATTGATCT GGTCGCCATG GTTGTCGACG ACCTCGTGGT GTGCGGCGCG GAGCCGCTGT TCCTGCTCGA CTACATCGCG TGCGGCTCCC TGGTCCCCGC GCGCGTGGCC GAGATCGTCT CCGGCATCGC AACCGGCTGC GAGCAGGCGG GGGCGGCGCT GGTCGGCGGG GAGACCGCCG AGCACCCCGG GCTCATGGGT AGCGACGACT ACGACCTGGC CGCGACGGGG GTCGGGGTCG TGGAGGCCGA CGACGTGCTC GGGCCGGAGC GAGTCCGGCC CGGGGACGTG GTGGTCGCGA TGGCATCATC CGGCATCCAC TCCAACGGCT TCTCGCTCGT ACGGCATATC TTGTTCGGTC CTGTCGATTC TGGCCAGCCC GGTGGGATTC CCGAGACCGC GCGGGAGGAT CTGGAGGCAT ACGTCCCGTC CCTGGGGGGC ACGCTGGGCA CGTCCCTGCT GGTTCCGACC CGCATCTATG CTCGGGACTG CCTGGCGCTG GCCGCGGCTG TCGAGGTGCA CACCTTCGCC CACATCACCG GCGGCGGTCT CGCGGCGAAC CTCGCCCGGG TCATCCCGCC GGGCCTGCTG GCCACGGTGG ACCGGGCGTC GTGGTCAGTG CCCCCGATCT TCGGTCTGCT CGCCGAGCGC GGCGAGGTGA CCCAGGCGGA CATGGAAGCC ACCTTCAACC AGGGAGTCGG CATGGTGGCG GTCTTGCCGG CCACCGCGGT CGCCGACGCT CTCGCGCTGC TCGCCGCGCG GGACGTGCCG GCCTGGGTGG CAGGGGAGGT CGGCACGGCG GACGCTCCGG AGCCAGCCGG CGTGGCCAGG GCCCGGCTCG CCGGCCGGCA TCCACGCTGA
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Protein sequence | MSGGLNSYRA AGVNVAAGER AVELMRGHVA RAIRPEVVGS LGGFAGLFAL DTARYRRPLL ASSTDGVGTK IAVARALDTH DTVGIDLVAM VVDDLVVCGA EPLFLLDYIA CGSLVPARVA EIVSGIATGC EQAGAALVGG ETAEHPGLMG SDDYDLAATG VGVVEADDVL GPERVRPGDV VVAMASSGIH SNGFSLVRHI LFGPVDSGQP GGIPETARED LEAYVPSLGG TLGTSLLVPT RIYARDCLAL AAAVEVHTFA HITGGGLAAN LARVIPPGLL ATVDRASWSV PPIFGLLAER GEVTQADMEA TFNQGVGMVA VLPATAVADA LALLAARDVP AWVAGEVGTA DAPEPAGVAR ARLAGRHPR
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