| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2950 |
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| Symbol | |
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| ID | 3849038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 3392434 |
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| End bp | 3393873 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637842618 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_443457 |
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| Protein GI | 83719927 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCCG CACGCATTCT CGCCATGGCC GGCGCGCTCG CGCTCTTCGC GTCGCAAGCG
ACACACGCGC AATGGCTCGA TCTCTACGGA ACCCGAAAGA ATGTGTCGGA TTCTCCCGCC
GCGCCGATGC TGAAGAACGC GACATGCCAG CCCGAGCTCG CGGACCGTCC GATCGAGCTC
GAAGACGCGA TCCTGCAGGC GATCTGCGCG AACCCGCAGG CACGGCGCGC GTGGGCCGAT
GCGCGCGCGC AGGCCGCACA GCTCGGCGTG AAGGAGGCAG CGTATCTGCC GACGCTCAAT
GCAACAGCGG GCATTCAGCG CAACTGGCAA ACGACGACGT ATGAGCAGAA CCTCGGCCCG
ATCACGCTCA CCGCCGACCA GAAGCAGATC CAGACGAGCC GCTACGGCGC GTTGAACCTG
AGCTGGGTGC TGTTCGATTT CGGCAAGCGC AGCGCGGCGC TCAGGCAGGC GCGCGAGCTC
CTCGCCGCCG CCAACGCGAC GCAGGACGAC ACGCTCCAGA CCATCCTGTT CAATGCCGCC
CAGGCGTATT ACAACCTGCG CGACACGCAG GCGGCGCTCG ACGCGGCGCG CACGACCGAA
CGCGTCGCGC AGGATAGCCT CACTGCGGCG AAGGCGAAGC ACGACGCCGG CGCGGGCACG
CTGAGCGATC AGTTGCAGGC GCAAACGAGC TATCGCCGCG CGGTGCTCGA TCGTGTGAGC
GCCGAAGGCG ACGTGCAGAA CGCGACGGGC GTCCTCGCCG TCGCGATGGG GCTCGACGCG
AACACGCCGC TGCGGATCGC GACCGCCGAG CCGCCGGTCG ATCGCAACGC GTTCGCCGAA
GGCATCGCGC AATTGATCGA CGAGGCGAAG CGGCAGCATC CGAAGCTCGT CGCCGCGCGC
GCGAAACTCG ACGCGGCGCG CGCGAACGTC GATGCGGTGC GTGCTCAGGG CCGCCCGACC
ATCTCGTTGA CCGGCAGCCT CAGCCGCAAC AGCCCGTCCT ATCAGCAACA GCCGGGCATC
CAGACCACCG CGAGCCACGG CAGCATGATC GGCGTGCAGG TGACGATTCC GCTGTTCGAG
GGCTTCGCGT CGGGCTACCG CGTCGCGGCC GCGCAAGCGC AGGCGGATGC GCAGGAGGCC
GATGTGCAGA ACACCGAGTT GAACGTATCG CTCGACGTAT GGAAGAGCTA TCAGAGCCTG
CAGACAGACA CCGCGAATCT CGACAACTCG AAGGACCTGC TCGACGATGC GCAGCGCTCG
CTCGACATCG CGCGCGGCCG CTACAAGGCG GGGGTCGGCA CGTTCACGGA GCTGCTGAAT
GCGCAAACGG CGCTCTCCGA CGCGCAGAAG CAGCGCGTGC AGGCGATATC GAAATGGCGG
ACTGCGCGCC TGAAGCTCGC GGCGAGCCTC GGCAGCATCG GCCTGTGGTC GGCGCATTGA
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| Protein sequence | MKPARILAMA GALALFASQA THAQWLDLYG TRKNVSDSPA APMLKNATCQ PELADRPIEL
EDAILQAICA NPQARRAWAD ARAQAAQLGV KEAAYLPTLN ATAGIQRNWQ TTTYEQNLGP
ITLTADQKQI QTSRYGALNL SWVLFDFGKR SAALRQAREL LAAANATQDD TLQTILFNAA
QAYYNLRDTQ AALDAARTTE RVAQDSLTAA KAKHDAGAGT LSDQLQAQTS YRRAVLDRVS
AEGDVQNATG VLAVAMGLDA NTPLRIATAE PPVDRNAFAE GIAQLIDEAK RQHPKLVAAR
AKLDAARANV DAVRAQGRPT ISLTGSLSRN SPSYQQQPGI QTTASHGSMI GVQVTIPLFE
GFASGYRVAA AQAQADAQEA DVQNTELNVS LDVWKSYQSL QTDTANLDNS KDLLDDAQRS
LDIARGRYKA GVGTFTELLN AQTALSDAQK QRVQAISKWR TARLKLAASL GSIGLWSAH
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