| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3480 |
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| Symbol | |
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| ID | 3836933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 4004973 |
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| End bp | 4006187 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637827601 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_428561 |
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| Protein GI | 83594809 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTGCGC TTCCCCTTCG CTGGACTGCG GCCGAATTGG CCGATCCCTT GGCTTTGGCC
CGGGCGCTGG TGGCTTGCCC CAGCGTCACC CCGCGTGATG CCGGGGCCCT TGATGTTCTT
GAATCCGCCC TGATCGCCTT GGGCTTCCGC TGCGTTCGCC TGCCCTTTGG CGCCGAGGGC
GGCGAGAGGG TGGATAATCT GTATGCCCGC CGCGGCGGCG CCGGCCCCTG TTTCGGATTC
GCCGGCCATA CGGATGTCGT GCCCGCCGGC GACGGCTGGA GCCGGCCGCC CTTTGGCGCC
GAAGTGGTCG ATGGTGCCCT GGTCGGCCGG GGAGCGGCCG ATATGAAAGG CGGCATCGCC
TGTTTCGTCG CCGCCGTCGC CCGGTTGATT TCCGGACCCG ATTCCACGGG ATCGATTTCC
AGACACGATC CCACGGGATC GATCGCCCTG CTGATCACCG GCGACGAGGA GGGCCCCGCC
CTTCACGGCA CCCGCAAGGT GCTGGAGTGG ATGGAGGGGG CTGGCGAAAG GATGGATCTG
TGTTTGGTTG GCGAGCCGAC CAATCCCGAA GGCCTGGGCG ACATGATCAA GATCGGTCGG
AGGGGCAGCC TGACCGCCAC CGTCACCCTT CTCGGCCGCG CCGGCCATGT CGCCTATCCC
CATCTCGCCG ATAACCCCCT TCATCGGCTC TCGACGTTGA CCGGCCTGCT GCTGGCCGAG
ACCCTGGACG ACGGCACGGC GCATTTCCAG CCTTCTAGCC TGCAGCTGAC CAGCATCGAT
GTCGGCAATC CGGCCGCCAA TGTCATTCCC GCCAAGGCCA CCTTGCGCTT CAATATCCGC
TTCAACGATC GCCATAGCGG CGAGTCGCTG TCGGCCTGGA TCCGCGCCCG CTGTCTGGCG
GCCTGCGATG GCGACGAAAG CGGCTTTTCC CTGGTTTTGG AGCATAGCGG CGATGCCTTC
CTGACGCCGC CCGGCCCGCT GTCGGATCTG ATCGCCACGG CCTGTCAGGC GGTCACCGGC
CGGCGGCCGG AGCTGTCGAC CTCGGGCGGC ACCTCCGATG CCCGTTTCAT TCGCAGCCAT
TGCCCGGTGG CCGAATTCGG TCTGGTCGGG CGAACCATGC ACAAGCCCGA TGAACGGGTG
GCGGTGGCCG ATCTCGAAGC CTTAAGCGAG ATCTACCGCC GGGTTCTGGT CGGTTTCTTC
GAGGCCCCAT GCTGA
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| Protein sequence | MSALPLRWTA AELADPLALA RALVACPSVT PRDAGALDVL ESALIALGFR CVRLPFGAEG
GERVDNLYAR RGGAGPCFGF AGHTDVVPAG DGWSRPPFGA EVVDGALVGR GAADMKGGIA
CFVAAVARLI SGPDSTGSIS RHDPTGSIAL LITGDEEGPA LHGTRKVLEW MEGAGERMDL
CLVGEPTNPE GLGDMIKIGR RGSLTATVTL LGRAGHVAYP HLADNPLHRL STLTGLLLAE
TLDDGTAHFQ PSSLQLTSID VGNPAANVIP AKATLRFNIR FNDRHSGESL SAWIRARCLA
ACDGDESGFS LVLEHSGDAF LTPPGPLSDL IATACQAVTG RRPELSTSGG TSDARFIRSH
CPVAEFGLVG RTMHKPDERV AVADLEALSE IYRRVLVGFF EAPC
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