| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2277 |
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| Symbol | |
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| ID | 3835705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2635578 |
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| End bp | 2637239 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637826379 |
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| Product | nickel ABC transporter, periplasmic nickel-binding |
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| Protein accession | YP_427364 |
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| Protein GI | 83593612 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0883096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCCG TCGGCTTGTG TTCGGAGGTC CGGGCAGGTT GGGACGGGGG GGCCGTCGTC
AGGGGAAGGG GAAAGACCGT GAGATCGTTT CATGCTTTGG TGGGGGCGCT TGGCATCGCG
TTATGCGCGC TGTCGCCCTT TGGCGCCGCC CGCGCCGGCG AAACCTTGAA TTTTTCCTGG
CCGCAGAACG TCGGCCCGCT CAATCCCCAT CTCTATTCTC CCAATCAGAT GTTCGCCCAG
GCGATGGTCT ATGAGCCGCT GGTGCGCTAT CGGGCCGATG GCGCCGTGGT GCCCTGGTTG
GCGCGCTCGT GGGAGATTTC GGCCGATGGC CGGGTCTATA CCTTCTCCCT GCGTCCCGAT
GTGCTCTTTG CCAATGGCGA GGCCTTTGAC GCCAAGGCGG TGGTCGCCAA TTTCGACGCG
GTTCTGGCCA ACCGCGCCCG CCACCAATGG CTGGAACTGG CCAATCAGAT CGAGAGGGTC
GAGGTCGTCG ACGACCTGGC GTTTCGCCTG ACCTTGAAAG AGGCCTATTA CCCGATCCTT
CAGGAACTCG CCCTGCCGCG GCCTTTCCGC TTCATCGCGC CTTCGCGCTT TGGCAAGGCC
GGCGGCACCA AGGACGGCAT TGTGGAGCCG GTCGGCACCG GACCTTGGAA ATTGGTGGCC
AGCGGCTTGG GCGAATACGA TCTGTTCGAG CGCAACGACG CCTATTGGGG CGAGAAGCCG
GCCTATGACA AGATCATGGT CAAGGTCATC CCCGATCCGA CGACCCGGGC CATCGCCTTT
GAAACCGGCG ATATCGATCT GATCTACGGT GTGGATGGTC CGGTCTATCC CGATACCTTC
GACCGCCTGC GCGCCATGGG CCTCTATACG GCCGCCCTGT CGGCTCCGGT GGAAACCCGG
GTGCTGGCGC TCAATTCCAA CCGCGCGCCG ACCAATGAGC TGGCGGTGCG GCAGGCGCTC
AATCACGCCA TCGACAAGGA CACGATGATC GCCTCGGTCT TCTATGGCAC CCAGACCCGC
GCCGACACCT TGTTTTCGAC CAATGTGCCC TATGCCGATA TCGCTCTGAA GCCCTATGCC
TATGATCGGG CGCGGGCGGC CGCCTTGCTC GAGGCGGCGA ACTGGCGTTT CGAGGCGGGA
AGCGACCTGC GCAGCAAGGA CGGCAAGCCG CTGCTCATCG ATCTCGTCTT CGTCGGCACC
GACGCGGTCG CCAAATCGAT GGCGGAAATC GTCCAGGGGG ATCTGCGCAA GATCGGTGTC
GGGGCCGTTC TTGTCGGCGA GGAGGAAAGC AGCGTCTTTT CGCGCCAGCA TGATGGTCGC
TTCGGCATGA TCTTCAATTC CACCTGGGGC GCCCCCTTCG ATCCCCATGC CTTCGTCAGT
TCGATGCGCG TGCCCTCCCA TGCCGATTAT CAGGCCCAAC GTGGCCTGCC CGACAAGGCC
GAGATCGACG CGACGATCTC GCGGGTTCTG GTCACCACCG ACGAGACGGA GCGTCAGGCG
CTGTACACCA AGATCCTGAC CCGCCTGCAT GATCAGGCGG TCTATCTGCC GCTGACCCAT
GTCACGGCGA TCGCCCTGGC CAAGAAGGCG GTGGGGCCCT TGTCGTTCGG GGCGATGTCG
AGCGAGATCC CCTTCGAAAA CCTCGTTCCC CTGGCGCCGT GA
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| Protein sequence | MPAVGLCSEV RAGWDGGAVV RGRGKTVRSF HALVGALGIA LCALSPFGAA RAGETLNFSW
PQNVGPLNPH LYSPNQMFAQ AMVYEPLVRY RADGAVVPWL ARSWEISADG RVYTFSLRPD
VLFANGEAFD AKAVVANFDA VLANRARHQW LELANQIERV EVVDDLAFRL TLKEAYYPIL
QELALPRPFR FIAPSRFGKA GGTKDGIVEP VGTGPWKLVA SGLGEYDLFE RNDAYWGEKP
AYDKIMVKVI PDPTTRAIAF ETGDIDLIYG VDGPVYPDTF DRLRAMGLYT AALSAPVETR
VLALNSNRAP TNELAVRQAL NHAIDKDTMI ASVFYGTQTR ADTLFSTNVP YADIALKPYA
YDRARAAALL EAANWRFEAG SDLRSKDGKP LLIDLVFVGT DAVAKSMAEI VQGDLRKIGV
GAVLVGEEES SVFSRQHDGR FGMIFNSTWG APFDPHAFVS SMRVPSHADY QAQRGLPDKA
EIDATISRVL VTTDETERQA LYTKILTRLH DQAVYLPLTH VTAIALAKKA VGPLSFGAMS
SEIPFENLVP LAP
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