Gene Rru_A1197 details

Gene Information

• Locus tag: Rru_A1197
• ID: 3834707
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 1413730
• End bp: 1415796
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637825286
• Product: chemotaxis sensory transducer
• Protein accession: YP_426285
• Protein GI: 83592533
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGATAA AGCGTTTCAT GATGATGTGC TTTTTTTCCA TATCGATCAT TTTGATCGTC 
ATGGCCTTTC TTCTTTTCCG CACGAGTTGG CAGGAAAGCC ACAGGGCCAA AGACGCCGGT 
GACCTTGTGG AGTTGTTGGG GGCCGCCACC TTGATTTCCG AGACCCTGGC CCCCGAACGC 
GGCGCCAGCA GCGTTTCCCT TGATGGCGGT CCCGAAGCGC GAAAAACCCT GCTCACCACC 
CGCGAGCGCC TGAACCAGAC TTTCGACCGG GTCGAAAGCA CCCTGCGGGC CAGTCCTTCG 
GACGACGGCC GGCGCGCCCT GCAGACCATC ACCAAGGTCC GTGCGGATTT GGCGGAATGG 
CGCCAGAAGG TCGACGCGAC CACCGACGGC GATCCGCAGC GCATCGTCGC CTTTCGCAAG 
GAGCTCATCG CCGGCATGCT CGGCTTGTTG ACCGAGGTTT CAAAGCTCAC CTCCGCCCTG 
GAGCACCAGT TGGGGCTGAC GGATGCCGAA GTGACCGTCC CGGCCGCGCT GGCTTTGATC 
ACCGGGCAGC TTCGCGACAA CGCCGGCCGT CAATCGACCC TGCATCTCGA CGCCGTGGTG 
GGCAAAAAGC CGTTCACCCC GACGCAATTG GCCCAGATGA GCCTTCTTGA TGGCCGCATT 
CAGCTGCTGT GGGAGCAATT GACCCGCGCC GGCACCGCCG ACGACAGCTC GCCGCGTCTG 
CGCGCCGCCG TTGAAGCGGT CGATGCCCAG TTCGTCAAAC CCTTCGCCGC CGCGCGCGCC 
CGGGTGACCG CCCATGCCGG CGACGGCGCC TATGATCTCG AAGGGGCTGA ATGGCGCAAA 
ATGACCGCCC CGATGCTCCA GTCGATCATG CTCGTCCGCG ACGCCGCCAT CGATGACGCC 
CGCCAGTTGG TTGACGAGAA GATCGCCAAG GCCTCCTTTG CCTTATGGGA GCTTTCGGGA 
TTGCTCGGCC TCGCCGTCGG CATCGTCGCC GTTATCATCA TCGTGACCGG TCGCCGGGTG 
ACGGCGCCCC TTGATCATCT GACCGCGACG ATCGTCGATT TCGCCCAAGG GGCGCGTGAG 
TTCGCCGTGC CCCATACCGA CCGCCGCGAC GAGATCGGCC GCATGGCCAA AGCCCTCGAG 
GTGCTGCGCG GCAACGCCCT GGCCGCCGAT ACCCAGGCCA AACACGCCGA AGACGAGCGC 
TTGGCCCGCG ATCAACGCCG CCAGAAAACC GAAGTCGTCA CTTCGGAGTT CGTCGGCTCG 
ATCGATGGCG TCGTCGCCGG CGTCACCCGC GCCGCCGAGC AGCTCCGCGC CGAAACCAAG 
TCCTTGTTGC AGACCTCCGA ACTCTCCTCG CGCCAGTCCG AGGTCGTCGC CACCGCCTCG 
GAAGACGCCA GCGCCAATGT TCAGACCGTG GCGGCGGCGG CCGAGGAATT GTCCAACAGC 
ATCCAGGAGA TCTCGCGCCG CGTCGCCGAA ACCGCCGCCA CCACCGATGG CGCCGTCCAG 
CAGGCCGAAA GCACCAACGC CATGGTCCGC AGCCTGACCG AAGCGGTGCG CAAGATCGGC 
GACGTCGTCA AGCTGATTTC CGATATCGCC AGCCAGACCA ATCTGCTGGC GCTCAACGCC 
ACCATCGAGG CGGCGCGGGC GGGAGACGCC GGCAAGGGCT TCGCCGTCGT CGCCGGCGAG 
GTCAAGACCC TGGCCAACCA GACCGCCAAG GCGACCGAGG ACATCCAGTC CCAGGTCGCG 
GCCATCCAGG TGGAAACCGA GCGCGCCACC ACGGCGATCG GCGCCATCAC GGCGACCATC 
GCCGCCGTCA ATCAGCACAC CATCGGCATC GCCGCCGCCG TCGAGCAGCA AGGCGCCGCC 
ACCACCGAGA TCGCCCGCAA CGTTCAACAG GCGGCCAACG GCACGGCCGA GGTCTCGTCG 
TCGATCGGCA AGGTTCTGGA AGCCGCCCAT CAGACCGGCG CGGCCGCCAC CAAGCTTTCA 
AAGCTGGCCG ATTCCCTGGC GGGGGATTCC ACCTTGCTCG ATCAGACGGT CGGCGGCTTC 
GTCACGCAGA TCCGCGTGGC GGGGTAA 

 

Protein sequence

MSIKRFMMMC FFSISIILIV MAFLLFRTSW QESHRAKDAG DLVELLGAAT LISETLAPER 
GASSVSLDGG PEARKTLLTT RERLNQTFDR VESTLRASPS DDGRRALQTI TKVRADLAEW 
RQKVDATTDG DPQRIVAFRK ELIAGMLGLL TEVSKLTSAL EHQLGLTDAE VTVPAALALI 
TGQLRDNAGR QSTLHLDAVV GKKPFTPTQL AQMSLLDGRI QLLWEQLTRA GTADDSSPRL 
RAAVEAVDAQ FVKPFAAARA RVTAHAGDGA YDLEGAEWRK MTAPMLQSIM LVRDAAIDDA 
RQLVDEKIAK ASFALWELSG LLGLAVGIVA VIIIVTGRRV TAPLDHLTAT IVDFAQGARE 
FAVPHTDRRD EIGRMAKALE VLRGNALAAD TQAKHAEDER LARDQRRQKT EVVTSEFVGS 
IDGVVAGVTR AAEQLRAETK SLLQTSELSS RQSEVVATAS EDASANVQTV AAAAEELSNS 
IQEISRRVAE TAATTDGAVQ QAESTNAMVR SLTEAVRKIG DVVKLISDIA SQTNLLALNA 
TIEAARAGDA GKGFAVVAGE VKTLANQTAK ATEDIQSQVA AIQVETERAT TAIGAITATI 
AAVNQHTIGI AAAVEQQGAA TTEIARNVQQ AANGTAEVSS SIGKVLEAAH QTGAAATKLS 
KLADSLAGDS TLLDQTVGGF VTQIRVAG