Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0258 |
Symbol | |
ID | 3834577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 319389 |
End bp | 320447 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637824337 |
Product | peptidase M48, Ste24p |
Protein accession | YP_425350 |
Protein GI | 83591598 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00863149 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCCCG GGGCGGCCCC GGTCGTTCAC GGCACCCTGA TCGAGGCCGG ACGCTCGCGC GGCGCGGCGG CCACCTTGGA ACCTGTGGCG GGGATGGCGC CGGCGGCCGG TCTGCTGCGC CTGTGCCGGG ACGGGGTGGT GGAAACCATC GCCGCCCACA GCCTGACGGC CAGCCCGCCC TTGGCCGGGG TTCCCCGGCG GCTGGTGCTT GAGGATGGGC GGGTGTTCAT CAGCCCCGAT AACGCGGCGG TCACGGCGCT GCTGCGCGCC GTGGGCGTCC GGCCGCCGGG GGGCTGGATC GCCGCCCTCG AACGGCTTCA CCCCCGGCTG ATCGGCCTTC TCGCCGTCGT GCTGGTGGTC GTGGTCCTGT CGCTGCGCTG GGGGGTGCCG CTGGCCGCCG ATGCCGCGGC GTCTTTGGTT CCCGCTTCGG TCGAGCGCCT GATCGGCGCC CAGGCCTTCG CCGTGCTTGA TGGCTCCGTC TTGGAGCCGA CCACGGTGGC GGCGGTCCGT CAGGACCGCC TGCGCGCCCG CTTCGCCGAT CTGACCAAAG CGGCCGGCCT GTCCGCCGGC GTCGCCCTGG AATTCCGCCA GGGAGGACCC TTTGGCGCCA ACGCCATCGC CCTGCCCGGG GGGCCGGTGG TGGTGACCGA CGAACTTCTG GCGCTGGCCG GCGAGGGCGA CGACGAGGCG GTGGTCGGTG TCCTCGCCCA TGAAATCGGC CATCTGGTCG GCCGTCACGG GGTGAAGCGC CTGATCCGGG CCGCCGGATT GACGATGATC GCGACGCTTG CCGTTGGCGA TATGGGCGAT CTGGTCAGCG AAGCCGCGGC CTATCCGGTC TTGCTGCTTG ATCGCGGTTA TAGCCGGAGC TTCGAGCGCG AAGCCGATTC CTACGCCATC GCCCTGCTGA CCCGCAGCGG CGGCGACCCC GCCTCCCTGG CCCGTGCTTT GGCTCGTCTT GCCGACTTGT GCGGCGCGAC TTGCACGCGC GGCGGCTGGT TGGCCAGCCA TCCCCCGCTC AACGAGCGCA TCCGCGACAT TAACGAACCC ACCCGCTGA
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Protein sequence | MTPGAAPVVH GTLIEAGRSR GAAATLEPVA GMAPAAGLLR LCRDGVVETI AAHSLTASPP LAGVPRRLVL EDGRVFISPD NAAVTALLRA VGVRPPGGWI AALERLHPRL IGLLAVVLVV VVLSLRWGVP LAADAAASLV PASVERLIGA QAFAVLDGSV LEPTTVAAVR QDRLRARFAD LTKAAGLSAG VALEFRQGGP FGANAIALPG GPVVVTDELL ALAGEGDDEA VVGVLAHEIG HLVGRHGVKR LIRAAGLTMI ATLAVGDMGD LVSEAAAYPV LLLDRGYSRS FEREADSYAI ALLTRSGGDP ASLARALARL ADLCGATCTR GGWLASHPPL NERIRDINEP TR
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