Gene Rru_A0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0016 
Symbol 
ID3833904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp17356 
End bp18378 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID637824086 
Product3-beta-hydroxy-delta(5)-steroid dehydrogenase 
Protein accessionYP_425108 
Protein GI83591356 
COG category[M] Cell wall/membrane/envelope biogenesis
[G] Carbohydrate transport and metabolism 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGCC GCGTCGTTAC CGTTTTCGGG GGCTCGGGCT CCATCGGCAG GCAATTGGTC 
GCCCTGTTGG CCGACCAGGG GGCGCGGGTG CGCGTCGCCG TGCGCGATAC CGAGAAGGCC
CATTTCCTCA AGCCCCTCGG CCAACTGGGC CAGATCGCCC CGATCTCGGC CTCGGTGTCG
GATGCCGCTT CGGTCAAGCG CGCCGTCGAA GGCGCCGATC AGGTGGTCAA TCTGGTGGGC
ATCCTGGCCG AAAGCGGCCG GCGGACCTTT CAGGCGGTTC ATGTCGACGG GGCGGCCACC
GTCGCCCGGG CCAGCGCCGA AGCCGGCGTC GACGCCCTGA TCCACATGTC GGCCCTGGGG
GCCGATGAGG CCTCGGACGC CAACTATAGC AAAACAAAGG CTTTGGGCGA AAAGGCCGTG
CGCGAGGCCT TTCCCGCCGC CACCATTTTG CGCCCCAGCG TTGTCTTCGG CCCCGACGAC
GGGTTCTTCA ACCTGTTCGC CGGTCTCCAG CGGCTTTCGC CGGTGCTGCC CTATTTCACC
CGCGACGGCT TCCGGCGCGG CGGCTCGGGC GTTTGCGGGA TCGATCTGGC GGGCAGCGGC
GGCCCGAAGT TCCAGCCGGT TTATGTCGGC GATGTCGCCC GCGCCATGAT CGCCATCCTC
GATACCCCGG CCCTGCGCGG CAAAACCTAT GAACTGGGCG GCCCCCGGGT TTATTCCATG
AAAGAGATCA TGGATCTGGT GGTCGCGGTG ACCCGCCGGC GCACCCTTGT GGTTCCGCTG
CCGTTCTGGG TCGCCCGGCT GCAGGGGCGT TTGCTTGAAA AGCTGCCCAA TCCGCCGCTG
ACCAGCGATC AGGTGCGGCT GATGGAAGTC GACAACGTGT GTTCGGGCGC CCTGCCCGGT
CTTGGCGATC TTGGCATCGA GCCCGAGGCG GCCGAGGCGA TCTTGCCCAC CTATCTCAGC
CGTTTCCGCG GGCTTGACCG CCACATGATC CTGCGCGGCG ACGGCCGCCC GCCAAAGGTG
TGA
 
Protein sequence
MTGRVVTVFG GSGSIGRQLV ALLADQGARV RVAVRDTEKA HFLKPLGQLG QIAPISASVS 
DAASVKRAVE GADQVVNLVG ILAESGRRTF QAVHVDGAAT VARASAEAGV DALIHMSALG
ADEASDANYS KTKALGEKAV REAFPAATIL RPSVVFGPDD GFFNLFAGLQ RLSPVLPYFT
RDGFRRGGSG VCGIDLAGSG GPKFQPVYVG DVARAMIAIL DTPALRGKTY ELGGPRVYSM
KEIMDLVVAV TRRRTLVVPL PFWVARLQGR LLEKLPNPPL TSDQVRLMEV DNVCSGALPG
LGDLGIEPEA AEAILPTYLS RFRGLDRHMI LRGDGRPPKV