| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0016 |
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| Symbol | |
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| ID | 3833904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 17356 |
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| End bp | 18378 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637824086 |
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| Product | 3-beta-hydroxy-delta(5)-steroid dehydrogenase |
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| Protein accession | YP_425108 |
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| Protein GI | 83591356 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGGCC GCGTCGTTAC CGTTTTCGGG GGCTCGGGCT CCATCGGCAG GCAATTGGTC
GCCCTGTTGG CCGACCAGGG GGCGCGGGTG CGCGTCGCCG TGCGCGATAC CGAGAAGGCC
CATTTCCTCA AGCCCCTCGG CCAACTGGGC CAGATCGCCC CGATCTCGGC CTCGGTGTCG
GATGCCGCTT CGGTCAAGCG CGCCGTCGAA GGCGCCGATC AGGTGGTCAA TCTGGTGGGC
ATCCTGGCCG AAAGCGGCCG GCGGACCTTT CAGGCGGTTC ATGTCGACGG GGCGGCCACC
GTCGCCCGGG CCAGCGCCGA AGCCGGCGTC GACGCCCTGA TCCACATGTC GGCCCTGGGG
GCCGATGAGG CCTCGGACGC CAACTATAGC AAAACAAAGG CTTTGGGCGA AAAGGCCGTG
CGCGAGGCCT TTCCCGCCGC CACCATTTTG CGCCCCAGCG TTGTCTTCGG CCCCGACGAC
GGGTTCTTCA ACCTGTTCGC CGGTCTCCAG CGGCTTTCGC CGGTGCTGCC CTATTTCACC
CGCGACGGCT TCCGGCGCGG CGGCTCGGGC GTTTGCGGGA TCGATCTGGC GGGCAGCGGC
GGCCCGAAGT TCCAGCCGGT TTATGTCGGC GATGTCGCCC GCGCCATGAT CGCCATCCTC
GATACCCCGG CCCTGCGCGG CAAAACCTAT GAACTGGGCG GCCCCCGGGT TTATTCCATG
AAAGAGATCA TGGATCTGGT GGTCGCGGTG ACCCGCCGGC GCACCCTTGT GGTTCCGCTG
CCGTTCTGGG TCGCCCGGCT GCAGGGGCGT TTGCTTGAAA AGCTGCCCAA TCCGCCGCTG
ACCAGCGATC AGGTGCGGCT GATGGAAGTC GACAACGTGT GTTCGGGCGC CCTGCCCGGT
CTTGGCGATC TTGGCATCGA GCCCGAGGCG GCCGAGGCGA TCTTGCCCAC CTATCTCAGC
CGTTTCCGCG GGCTTGACCG CCACATGATC CTGCGCGGCG ACGGCCGCCC GCCAAAGGTG
TGA
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| Protein sequence | MTGRVVTVFG GSGSIGRQLV ALLADQGARV RVAVRDTEKA HFLKPLGQLG QIAPISASVS
DAASVKRAVE GADQVVNLVG ILAESGRRTF QAVHVDGAAT VARASAEAGV DALIHMSALG
ADEASDANYS KTKALGEKAV REAFPAATIL RPSVVFGPDD GFFNLFAGLQ RLSPVLPYFT
RDGFRRGGSG VCGIDLAGSG GPKFQPVYVG DVARAMIAIL DTPALRGKTY ELGGPRVYSM
KEIMDLVVAV TRRRTLVVPL PFWVARLQGR LLEKLPNPPL TSDQVRLMEV DNVCSGALPG
LGDLGIEPEA AEAILPTYLS RFRGLDRHMI LRGDGRPPKV
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