| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_B0047 |
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| Symbol | |
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| ID | 3833378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007641 |
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| Strand | + |
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| Start bp | 49682 |
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| End bp | 50716 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637824066 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_425083 |
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| Protein GI | 83582777 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.436263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAT GTGCCCTTAT CACAGGCATC ACCGGGCAAG ATGGCGCCTA TCTTTCTCAG
CTTCTGATTT CAAAAGGATA TCGTGTCTAC GGAACAGTAC GCCACTTGGC TACCGCTAAT
ATATGGCGAT TGAGAGAGCT TGAAATTCTG GATAAAACAA ATCTAATTGA AATAGATCTT
TTAAATTATG ACAGCATCTA CGATGCCATC AAGACGACTA ATCCGGATGA AATCTATAAT
CTTGCCTCTC CCAGCTTCGT CGGAACTTCT TTTGAACATC CAATTTATGC TGGAAATGCC
GGAGGATTGG CTGTCACGCG CCTTCTCGCG GCTATTTTGG CAGCCGATCC TGACATCCGC
TTTTATCAAG CCTCAACGTC AGAAATGTTT GGCAAGGCGC AGACCACCCC GCAGACGGAA
ACCACGCCCT TCTATCCCAG AAATCCCTAT GGAGTGGCCA AGTTATATGG CCACTGGATG
ACGGTGAACT ACCGTGACTC CCACAACCTC TTCGCATGCT CCGGCATTCT GTTTAACCAT
GAATCGCCCT TGCGCGGCAG GGATTTCGTC ACAAGAAAAA TCAGCCTGGG ACTATCGTGC
ATCAAAGAAG GGCAGCAGGA TATTCTAAGA CTTGGCAATC TGGAGGCCCA ACGGGACTGG
GGTTTCGCTG GAGATTATGT CGAGGGGATG TGGCGGATGC TTCAGCACGA GATTCCCAGC
GATTATATTT TGGCGACGGG AAAACCCCGT TCTGTGCGGG ACGTCGTCGA TCTCGCGGCC
GGCGCTTTGG GAATGGATCT TCTCTGGGAA GGGACCGGCG CTGAAATGGT CGGCATCGAA
CGATCGTCCG GCCGAAAAAT TGTCGTCGTC GATCCGGCTT TTTTCCGCCC CATAGAAAAA
GAGCTGCTAA CCGGGGTCGC AGAAAAAGCC CATTCCGTGC TGGGATGGCG GCAAAGAATG
GGCTTTGAAG ATCTCATTGC CCAGATGACA GAGAGAGACC ACGATCGCGT TATAAAAAAA
GACCTATTTT ATTAA
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| Protein sequence | MSKCALITGI TGQDGAYLSQ LLISKGYRVY GTVRHLATAN IWRLRELEIL DKTNLIEIDL
LNYDSIYDAI KTTNPDEIYN LASPSFVGTS FEHPIYAGNA GGLAVTRLLA AILAADPDIR
FYQASTSEMF GKAQTTPQTE TTPFYPRNPY GVAKLYGHWM TVNYRDSHNL FACSGILFNH
ESPLRGRDFV TRKISLGLSC IKEGQQDILR LGNLEAQRDW GFAGDYVEGM WRMLQHEIPS
DYILATGKPR SVRDVVDLAA GALGMDLLWE GTGAEMVGIE RSSGRKIVVV DPAFFRPIEK
ELLTGVAEKA HSVLGWRQRM GFEDLIAQMT ERDHDRVIKK DLFY
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