Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_B0030 |
Symbol | |
ID | 3833361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007641 |
Strand | - |
Start bp | 28989 |
End bp | 30377 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637824049 |
Product | hemolysin-type calcium-binding region |
Protein accession | YP_425066 |
Protein GI | 83582760 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.328921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAGTA ATGTCGGTAG TTTTTTCAAC GAAGAGTTTT ATCTGCGCGT TTACAGCGAT GTTGCCGAGG CTGTCAAACA AGGCGCCATC TCTTCAGGGT ATGAGCATTT CCTGCGCTAC GGCATGGCCG AAGGGCGCAA TCCCAACCGG TTTTTCGATA CGGCTTACTA TCTCAACCAA AACCCCGATG TGGCCTCGGT GGTAAAGACG GGATCCATCA CCGCCTATAG CCATTTCGTC GACAATGGCA ATGTCGAGCT GCGTAGTCCC ACGGCGTTCT TCGACGTCGA TTGGTATCTG ACCAATAACA ACGATGTGGC GGTGAAGGTT TATCGCGGCG AGTTGACCGC CTATGGCCAT TTCTTTGCCA ATGGCGCCGA TGAGCTGCGG CAGGCGACGC CGTTCTTTTC CCCCCTCGAC TATATGGCGG CCAATCCCGA TGTGACCTCG TCGCCGCTGC GCCATTTCGC CGAATTCGGC ATCGCCGAAA ACCGCGATCT GGGCAATGGC CTCAAGATGA CCTACTTCGC TCAGGATACG ATTTTCACCG ACGCGCTGTT CACCGGAAAT TTCGCCGCCG CCTTCGCTCG CGTCGCGCAA ATCGCCCCCT TCCTCCCCTC CTTCGAGAAG CCGGCGACCT ATCTCTATTC CTCCGATCTG GAAGCTCCGA CGGATTTCGT CTCCAGTAGC GTTTTCCTGG CCGTTCCAAC CGGTCTCTCT GGGGTAACCG CACCGGCGAC CTCGTCTTCC TTCTCCCAAT TGACCATCGG CCAAGCCAGC GACGGAACCC TCACCCTGAG CGGAACTGGA GCCAAGGCGG GGGTCACCAT CGACCTCGCC AACAACCAAA TCCTCGATGG CGGCAAGACC TTGCTCCTGC GCACCGACAG CGTTCACTCC ACCGTCGATG CCAGCGGGGT CAAAATCGCC AGTGTCACCC TGACCGGAAC ATCACGGGTG GAAACCCTGA CCGGCAGCGC CCAGGCCGAC ACCCTGTCGG GCGGCGCCGG AATGGATACC CTGACCGGCG GAGCGGGGGC CGATACCTTC ATTCTCGCCT CAAGCTCGGC CAATGACGCC GACACCATCA CCGATTTCGT CTCGGGTACC GACAAGATCC AGCTTAGCGA CGCCGTCTAT TCCCTGACGG GCAGCCGCGG CGCCGCCCTG GCCGCCACCG ATTATCATGA GGTCGCCACG GTGACCGCCT TGACGGGGGG AACCCTGGCC CTGGCGACGA ATGCTGAGAA AATCATCGTC GTGGCCGACA GTGGCGAGAT CTATTTCAAC GACGATGGCG CGACCGCTGG CGGTCTGACC CTGATCGGGG TTCTCAAGAA CGCCGGAGCC GCCGTCGATC CGGCGATCGG AGACTTCGTC CTCGGCTAG
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Protein sequence | MASNVGSFFN EEFYLRVYSD VAEAVKQGAI SSGYEHFLRY GMAEGRNPNR FFDTAYYLNQ NPDVASVVKT GSITAYSHFV DNGNVELRSP TAFFDVDWYL TNNNDVAVKV YRGELTAYGH FFANGADELR QATPFFSPLD YMAANPDVTS SPLRHFAEFG IAENRDLGNG LKMTYFAQDT IFTDALFTGN FAAAFARVAQ IAPFLPSFEK PATYLYSSDL EAPTDFVSSS VFLAVPTGLS GVTAPATSSS FSQLTIGQAS DGTLTLSGTG AKAGVTIDLA NNQILDGGKT LLLRTDSVHS TVDASGVKIA SVTLTGTSRV ETLTGSAQAD TLSGGAGMDT LTGGAGADTF ILASSSANDA DTITDFVSGT DKIQLSDAVY SLTGSRGAAL AATDYHEVAT VTALTGGTLA LATNAEKIIV VADSGEIYFN DDGATAGGLT LIGVLKNAGA AVDPAIGDFV LG
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