Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2603 |
Symbol | |
ID | 3775200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2685051 |
End bp | 2686676 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637801057 |
Product | cytochrome-c oxidase |
Protein accession | YP_401620 |
Protein GI | 81301412 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.240231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCA CCGCTTTTCT ACCGGATCAG TCACCGGAAA AAATTCATAG TAGTACTGGC TGGCGCGAAT ACTTTAGCTT TAGTACCGAT CACAAGGTGA TTGGCATCCA GTATTTAGTT TTAACGTTCA TCTTTTATTT AATTGGTGGG GCGTTAGCGA CAGCAGTTCG TCTTGAACTT GCCACACCGA CTGTGGATGT CGTCAGCCGT GATTTGTACA ACCAACTCTT CACGGTTCAC GCTACCGTCA TGATTTTCCT CTGGATCGTG CCAGCGGGTA GTGGTGCTTT TGGGAACTAT CTCATTCCCC TGCTAATTGG TGCACGGGAC ATGGCATTCC CCAAGTTGAA TGCTGTCGCC TTTTGGCTTC TGCCGCCAGC AGGAATTCTC TTAATTGCGA GCTTCTTAGT TGAAGCCCCA AGCTCAGGCT GGACGTCCTA TCCACCCCTC AGCCTGATGA GTGGTAAGAC CGGAGAGATG ATTTGGATCC TCAGTGTTCT GCTGCTCGGA ACATCCTCGA TCCTGGGCGC TATCAACTTT GCCACCACAA TCATTAAGAT GCGCCGCCCT GGCTTGGGAT GGAATCAAAT GCCATTGTTT TGCTGGGCAA TGCTATCTAC CTCAATCATG GCAATCCTAT CGACGCCAGT CTTGGCTGGT GCCCTGATTC TGCTCAGCTT TGACTTAATG GTAGGCACGA ACTTCTTCAA TCCATTAGGT GGTGGTAATC CTGTCGTTTA TCAGCACTTG TTCTGGTTCT ATTCTCATCC AGCGGTCTAC ATTATGATCC TGCCGGTTTT TGGCATGATC TCTGAGATTC TGCCAGTTCA TGCTCGCAAG CCTATCTTTG GCTATCAAGC GATCGCTTAT TCCAGCCTAG CGATTACCTT CCTGAGCCTA ATTGTTTGGG CGCACCACAT GTTTACTAGT GGTACCCCAC CGTGGCTGCG AATGTTCTTT ATGATTGCCA CCATGATCAT TGCCGTTCCA ACAGGCATTA AAGTTTTTAG CTGGTTGGCA ACGCTTTGGG GCGGGAAACT TCAACTGACG AGTGCCCTAC TCTTCAGTGT CGGCTTTATT TCGATGTTTG TGATTGGAGG GCTGAGCGGC ATTATGCTCG CCTCAGTTCC TGTTGATATT CATGTTCACG ATACCTACTT CGTCGTTGCG CACTTCCACT ATGTTCTCTT CGGGGGCAGT GTTTTTGGCC TCTATGCTGG CATCTATCAT TGGTTCCCCA AAATGACTGG GCGTCTGTTG AATGAGGGCT GGGGAAAAGT TCATTTCATC TTGACGCTTG TGGGCTTTAA CCTCTGCTTC TTACCGATGC ACTGGCTAGG CTTGCAGGGC ATGCCGCGCC GCGTGGCTGA ATACGATCCA CAGTTTGCCA CGGTCAACTT AATCTGCTCA ATTGGTTCAT TTATCCTGGC TATTTCCACA ATTCCCTTCC TAATCAATGC AGTTTGGAGC TGGATTGCAG GCGCTAAAGC TGGTCCTAAC CCTTGGGGAG GCATTACACC CGAATGGCTT ACCAGTTCTC CTCCGCCTGT TGAGAATTGG GTTGGAGAAG CTCCGCTCGT GACCAATCCC TATGGCTATG GCGATCGCAA AATTATTCAG CCTTAA
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Protein sequence | MTTTAFLPDQ SPEKIHSSTG WREYFSFSTD HKVIGIQYLV LTFIFYLIGG ALATAVRLEL ATPTVDVVSR DLYNQLFTVH ATVMIFLWIV PAGSGAFGNY LIPLLIGARD MAFPKLNAVA FWLLPPAGIL LIASFLVEAP SSGWTSYPPL SLMSGKTGEM IWILSVLLLG TSSILGAINF ATTIIKMRRP GLGWNQMPLF CWAMLSTSIM AILSTPVLAG ALILLSFDLM VGTNFFNPLG GGNPVVYQHL FWFYSHPAVY IMILPVFGMI SEILPVHARK PIFGYQAIAY SSLAITFLSL IVWAHHMFTS GTPPWLRMFF MIATMIIAVP TGIKVFSWLA TLWGGKLQLT SALLFSVGFI SMFVIGGLSG IMLASVPVDI HVHDTYFVVA HFHYVLFGGS VFGLYAGIYH WFPKMTGRLL NEGWGKVHFI LTLVGFNLCF LPMHWLGLQG MPRRVAEYDP QFATVNLICS IGSFILAIST IPFLINAVWS WIAGAKAGPN PWGGITPEWL TSSPPPVENW VGEAPLVTNP YGYGDRKIIQ P
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