Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2448 |
Symbol | |
ID | 3774467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2524464 |
End bp | 2526071 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800896 |
Product | GTP-binding protein HflX |
Protein accession | YP_401465 |
Protein GI | 81301257 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00382552 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGCCTCA GCCTCGATTG CTTGGCGACT CCAGAATTTG CAGAACGGCT GGCTGCGATC AGTGCAGATA TAGAACAACC CATCACGGTC TACCTCGATC GCCGCGGTCA TGTCACCCGC GTTGGCGTCG GCAATGTCCG CCAAACCCGA ATTCCGCCAG TCGAACTGCC GCGCTATGGG GCGGGTCGTC TCTGCGGGTT ACGCTGTCTA ACTACGAGCC TCAGTCCAGA GCCACCGGAT GAAGGTGCAC TGACCACCAT GGCGCTGCAG CGGTTGGATG CCCTGATTTG GCTCTGCGTG ACTCGCCAAG GCAAAACCCG ACGAGGCGGT GGAGCGACTG GCTATGTTGC TCAAACCTAT CTGGCTCATT TACTGGCTCA CCCCGACCAG CGCTGGACGG TGTCGCCGGA GCTGGATTTA GAAGATCTCA CGCAGCAGCC CTGCGTTGAA TTTGTCGAGG CGCTGGAGGA AGAGCTGCAG CGGGGACTCA CTAGCCAAGC CGTTGCCGAA GGACGCGATC GCGTTCTCCT CGTTGGTGTC AAGACGCAAG GCATTAGCGA TTGCCGGTTC CAAGAAGGGT TGTTGGAACT GCAGCGACTG GTCGAAACAG CGGGTGGCGA AGTTGCCTCC ATCCTCCAGC AAAAACGCCT GCGGCCCCAT CCCCAAACGG TAGTGGGTGA GGGAAAAGTC GCCGAAGTGG CGCTGGCGGC TCAAACCCTC GGGGTCAATC TAGTTGCTTT CGATCGCGAT CTCTCCCCAG CCCAAGCTCG AAATCTTGAG CGGGAAATTG GCCTGCGGGT CGTCGATCGT ACCGAGGTGA TTCTTGATAT TTTTGCGCAG CGCGCCCAAT CGGGTGCAGG CAAACTACAG GTCGAACTAG CCCAGTTGGA ATACAAACTG CCACGCCTGA CCGGGCAAGG CCAAGCGCTG TCGCGCCTAG GCGGCGGCAT CGGCACCCGG GGGCCGGGCG AGACCAAACT GGAGACGGAA CGCCGCGCGA TTCAGCGCCG GATCACGCGG CTGCAACGTC AAGTCACAGA GCTGCAAGCG CACCGATCGC GGCTGCGGCA ACATCGCCAG ACCCTACCTT CGATCGCGAT CGTGGGCTAC ACCAATGCTG GCAAGTCAAC GCTGCTCAAC ATCCTCACCC AAGCAGAGGT CTACGCAGCC GACCAGCTGT TTGCGACCCT TGACCCGACC ACCCGACGGC TGGTACTCAA TGCCAACCCA GGGTCAGAAC CAGACGTGGT CCTGCTGACC GATACGGTGG GCTTTATTCA CGAGCTGCCG CCCCCCTTGG TCGACGCCTT CCGTGCCACC CTCGAAGAAG TCACAGAAGC GGATGCGCTG CTGCACCTTG TTGATCTGTC TCACCCGGCT TGGTACGCCC AAATCCAGTC AGTCATGAGC ATTTTGCGAG AAATGCCGGT GACGCCAGGC CCAATTTTGT TGGCCTTTAA TAAAATCGAC GCAGCAACCA GTGAAACCTT GGCAATCGCT CAAGCCGAAT ATCCGCAGGC CGTTTTTCTC TCAGCTTCTC GGGGCTTGGG ACTCGAAACC CTTCGACAGC GATTAGGACA ACTGGTTCAT TATGCCCGCA CTCACTAA
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Protein sequence | MRLSLDCLAT PEFAERLAAI SADIEQPITV YLDRRGHVTR VGVGNVRQTR IPPVELPRYG AGRLCGLRCL TTSLSPEPPD EGALTTMALQ RLDALIWLCV TRQGKTRRGG GATGYVAQTY LAHLLAHPDQ RWTVSPELDL EDLTQQPCVE FVEALEEELQ RGLTSQAVAE GRDRVLLVGV KTQGISDCRF QEGLLELQRL VETAGGEVAS ILQQKRLRPH PQTVVGEGKV AEVALAAQTL GVNLVAFDRD LSPAQARNLE REIGLRVVDR TEVILDIFAQ RAQSGAGKLQ VELAQLEYKL PRLTGQGQAL SRLGGGIGTR GPGETKLETE RRAIQRRITR LQRQVTELQA HRSRLRQHRQ TLPSIAIVGY TNAGKSTLLN ILTQAEVYAA DQLFATLDPT TRRLVLNANP GSEPDVVLLT DTVGFIHELP PPLVDAFRAT LEEVTEADAL LHLVDLSHPA WYAQIQSVMS ILREMPVTPG PILLAFNKID AATSETLAIA QAEYPQAVFL SASRGLGLET LRQRLGQLVH YARTH
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