Gene Synpcc7942_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2230 
SymbolrplW 
ID3773886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2297905 
End bp2298207 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content56% 
IMG OID637800677 
Product50S ribosomal protein L23 
Protein accessionYP_401247 
Protein GI81301039 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.36925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAAG CTAATATTCG TGCACTCGCG GATATCATCC GTCGCCCGAT CATCACCGAG 
AAGGCAACGC GCCTACTGGA AAACAACCAG TACACCTTTG AAGTCGATCC CCGCGCGAGC
AAGCCTGAAA TCAAGGCTGC GATCGAAGCC CTCTTCCAAG TCAAAGTGGT GGGTTTAAGT
ACGCAGTTAC CACCGCGGAA AGCTCGTCGT GTTGGCCGTT TTGCCGGTCA CCGTGCCCAG
GTCAAGCGAG CTGTTGCCCG CTTGGCTGAT GGCGACAGCA TCACGCTCTT CCCCGAAGTT
TGA
 
Protein sequence
MAEANIRALA DIIRRPIITE KATRLLENNQ YTFEVDPRAS KPEIKAAIEA LFQVKVVGLS 
TQLPPRKARR VGRFAGHRAQ VKRAVARLAD GDSITLFPEV