Gene Synpcc7942_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2060 
Symbol 
ID3774279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2137504 
End bp2138169 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content59% 
IMG OID637800505 
Producthypothetical protein 
Protein accessionYP_401077 
Protein GI81300869 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.746586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAA TTGCCGAGCG GTTGGCCAGT CTCCGATCGC AACTGCCTCC CAGCGTTCAG 
CTGATTGCTG TCAGCAAGAA CCATCCCGCT GCTGCCATCC GAGAAGCCTA TGCAGCAGGT
CAGCGGCACT TTGGCGAAAA TCGGGTCCAA GAAGCGATCG CTAAGCAAGC GGAACTGACG
GATCTGCCCG ATTTGACTTG GCATCTGCTG GGAAAACTGC AGAGCAATAA AGCCCGGAAA
GCTGTCGAGC ATTTCGACTG GATTCATTCA GTTGATAGCT GGGCCTTGGC TGAACGACTC
GATCGCATTG CGGGAGAGTT GGGGCGATCG CCCAAGCTTT GCCTCCAGGT GAAGCTCCTG
CCTGACCCCA ACAAAGCGGG CTGGGACCCT GCTGATTTGC GGGCTGAGTT ACCGCAGCTC
AGTCAACTCC AACAGGTACA AATCCGCGGC TTGATGGTGA TTGCGCCCCT CGGACTCACC
GCCGCTGAGA CTCAGGCTCT GTTTGCGCAG GCTCGCACCT TCGCCGCCGA GTTGCAGCAG
CAGGCTCCGC AGCTACGGCT CACGGAACTC TCGATGGGCA TGTCGAGTGA CTGGCCTTTG
GCTGTGGCGG AAGGGGCAAC TTGGATTCGA GTCGGAACCC AGTTATTTGG GCCGCGATCG
CTGTAA
 
Protein sequence
MAQIAERLAS LRSQLPPSVQ LIAVSKNHPA AAIREAYAAG QRHFGENRVQ EAIAKQAELT 
DLPDLTWHLL GKLQSNKARK AVEHFDWIHS VDSWALAERL DRIAGELGRS PKLCLQVKLL
PDPNKAGWDP ADLRAELPQL SQLQQVQIRG LMVIAPLGLT AAETQALFAQ ARTFAAELQQ
QAPQLRLTEL SMGMSSDWPL AVAEGATWIR VGTQLFGPRS L