Gene Synpcc7942_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1969 
Symbol 
ID3774156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2040474 
End bp2040851 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content51% 
IMG OID637800414 
Producttranscriptional regulator AbrB 
Protein accessionYP_400986 
Protein GI81300778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAA TCACGCCACT GACCGGTAAA GCATTGCTAA CACGACTGAA AGAACTCGGT 
AACGCGAGTC GTTCGGAAAC AGCCAAGGCC TGCGGCTACT ACTCCATCAC CAAAACAGGC
CGTGAACGCA TTAACTTTAC AGCGTTCTAC GAAGCACTCC TCGCCTCCAA AGGCGTTGCT
TTTGATGAAG CAGCACCACG TAAAGGCCGC CACCCCAGCT ACACCGTTCG CGTTCAAAGC
AACGGTAATC TCTTGATTGG TTCGGCTTAT ACCAAGCAGC TGAACCTGCA AGTTGGTGAT
GAGTTTGAAA TCAAATTGGG CCGTCGTCAA ATCCGTCTTG TCCCTGTCAA CGGCGGTGAT
GACGATTCCG AAGAATAA
 
Protein sequence
MTSITPLTGK ALLTRLKELG NASRSETAKA CGYYSITKTG RERINFTAFY EALLASKGVA 
FDEAAPRKGR HPSYTVRVQS NGNLLIGSAY TKQLNLQVGD EFEIKLGRRQ IRLVPVNGGD
DDSEE