| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1624 |
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| Symbol | |
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| ID | 3775693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1692985 |
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| End bp | 1693644 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637800060 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_400641 |
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| Protein GI | 161344093 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.137296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0697591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTACAG GGTTAGTGCA AGCGCTCGGG GAACTGACGG TTCTGGAGGG ATCAGTTCGA
ATCCACTGCG TTGCTGGCGA CACACAGTCG ATTTTGCAGG ATCTAGCGAT CGGCGACAGT
ATTGCTGTCG ATGGCATTTG TCTGACGGCA ACTCAATGCC TCGGTAATGG GTTCTTGGCG
GATGTTTCAC CGGAAACGCT CCAGCGGTCG ACCTTGGGGG ATTTGCCCCC CGGCAGTTTG
GTCAACCTCG AAAGCTCCTT GCGGGCAGGC GGTAAAGTCG GCGGGCACTT TGTCACGGGT
CACGTCGATG GCGTCGGCTG GCTGATCAGT GCTGAAGCTA CTGAACAATC TTGGCTGCTG
AAATTTGGAG TACCAGCCGG TTCACTGCAG CGCTATCTCG TCGAGAAAGG CAGTATCGCT
GTCAATGGCA TCAGTTTGAC GATCGCGGAC TGCGATCGCG AAGGGCATTG GTTTACCGTG
GCGGTGATTC CCCACACCTA TCAGGAGACG ACTCTGAGAC GCCTGCAAGC CGGCGTTCGC
GTCAACCTTG AGGGCGACAT ACTCGGTAAG TATGTGGAAC GGCTGCTGCG TCATTCGGGT
CATTCCACCC CCCAGTCCGA TATCAGCCTA GAGTTCTTGA CAGAGCATGG CTATGTCTGA
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| Protein sequence | MFTGLVQALG ELTVLEGSVR IHCVAGDTQS ILQDLAIGDS IAVDGICLTA TQCLGNGFLA
DVSPETLQRS TLGDLPPGSL VNLESSLRAG GKVGGHFVTG HVDGVGWLIS AEATEQSWLL
KFGVPAGSLQ RYLVEKGSIA VNGISLTIAD CDREGHWFTV AVIPHTYQET TLRRLQAGVR
VNLEGDILGK YVERLLRHSG HSTPQSDISL EFLTEHGYV
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