| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1527 |
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| Symbol | |
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| ID | 3774951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1586243 |
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| End bp | 1588759 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799960 |
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| Product | nitrogen assimilation regulatory protein |
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| Protein accession | YP_400544 |
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| Protein GI | 81300336 |
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| COG category | [C] Energy production and conversion
[K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0348] Polyferredoxin
[COG1221] Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000360333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAAACGA GCGACAAACA GCGCTGGCTG TTAGAGAACA CTTTGTTTAA TGGCCTGTCG
GAGCGGGCAA TCGCCGCGAT CGCCACAGGA CTCTCGGAAG TTACGGTTCC CAGCGGTCAG
GTTCTGTCTG ATCTCGACTC GTTACCGAAT GCGCTCTTGA TTTTGGTTCA CGGTGAACTC
GATCGCCAGC AACCCATGAC AGGCCAGTGC GATCGCCTGT TGCCCGGTAG CGTACTCAAC
CTGCGGGAAA TCCTGCTCCA GCAACCAGTC ACCCAGCAGG TCACGACAGC AACAGATGTC
CTTGTCTGGC AACTGTCGGC CGAGCAACTG CAAGCGATCG CCACAGAGCT GAATGAACTT
GATCGCTACC TCTCCGCACA ATTGGCAGCA GAGCTAGATG CGGTCACCGC TCAACTGCGT
TTTGAACAGG CACGGTTGCG GGAGTTGCAG CCCTACGTTA TCCCCAAAAC TAAGCGGGGG
ATTGTCGGTA GTAGTCGCTA TGCCCAACGG CTACGACAGG AAATTCGCCA AGCCTCGATC
CGCAACGATC GTCAGCCGGT ATTGATTTTT GGCGAGCCAG GTCTGGGTAA AGACAACATT
GCTGCCTTGA TCCACTTCGG TTCGCGGGAT CGACGTGAGC CCCTGATCAA AATCAACTGC
AATACGCTGC AGCCCAATGG TGCGGAGCTA TTTGGCCGTA TTAATGAGCG ACGGGGACTG
CTCGATTGGG TGGGCAAGGG CACAGTGCTG CTCAACAACG TCCAAGACTT ACCAACTGAT
TTGCGATCGC GGGTGATTGA GCTCCTCGCC ACTGGCTACT ATCGCCCGCT ACCAACCCTG
CAAGTACCGG AGCCAGAGCC CCAAGCGTGC CTAGCGCGCC TGATTTTGGT GGCGGAAACT
AACCCTACTG ACTTGGCACG GCACTGCGTT CAAACCATCA AGGTGCCGCC TCTGCGGATC
CGGAAAGCCG ATATCGTCGC CAGCGTCAAA TACTTCCTCA GTCGCTTTTG CCAAACGCGA
CGCCAGCCTC GCCCGAAGCT AACGCCGGAA GCCGAACGCC AGCTGCAGAA CTACGACTAT
CCCGGCAATA TTACTGAGCT GGAAAGTCTG GTGGAGCGGG CTTTAGTACA AAGCGGACAG
GCTGCCGTGC TGACCGAAGA TGTCTTTTGG TTTGCCTCCA CGAAAGGCGA TCGCTTCCGC
TGGAACCTGC TCAATGCCTA TCCTCGCCTG CGGCAACTGC TACGCAGCGA CTGGTGGCCA
ACGCGGATCA ACTACGGCCT GATTCTCGGG GTGTATACGG CTGTGGTTGC CCTGCTGTTT
TGGGGTCCGC AAACCCGCGC TGAGAACGTG GGGTTAACCC TGTTTTGGGC AGGCTGGTGG
CCTCTGATTT TGCTGGCGTT TCCCTTTGTG GGGCGGCTTT GGTGTGCCTA TTGCCCCTTC
ATGATCTACG GCGAACTGGT GCAGTGGGTT TCCCTGAAGC TCTGGCCGCG ATCGCTCTTG
CCCTGGCCAC GGGCGGCAGC AGAGCGCTGG GGTGGCTGGT TCCTGTTTGG CCTCTTCGCC
CTGATTTTGC TCTGGGAGGA GCTCTGGCAC CTCGAAGACG TTGCTTGGCT GTCGGCCTGT
CTCTTGCTGC TGATTACCGC TGGGGCTGTT ACTTTTTCGC TGCTATTCGA GCGACGTTTT
TGGTGTCGCT ATCTCTGCCC GATCGGTGGT ATGAATGGCC TCTTCGCCAA ATTGGCGGTA
ATTGAACTGC GGGCCAAACG CGGTGTCTGC TCTGCCACCT GCAACACCTA TCAATGCTAC
AAAGGTGGCC CTGCAAAAGG GGAAGGCCAA GAGACCATGG GTTGCCCGGT CTATTCCCAT
CCGGCTCAGT TGGTGGATAA CCGCAACTGC GTTCTCTGCA TGACCTGTCT CAAGGCCTGC
CCCCATCGCT CGGTTGAGCT GAATCTCCGG CCACCGGCGA TCGAACTATG GACCACCCAT
GTCGCGACAC GATCGGAAGC TGCTCTGCTC TTCCTCTTGT TGGGTGCAGT GTTTCTGCAT
CATCTGCCCC AGATTGCTCA GGTTCTAGGT TTAGGCGATC GCTGGCTCAC TTCCTTGGGA
CTGCATGCCA TTTTGGCGAC GGCTGTCCTG GGTACGCCGG GGTTACTGGC CTTTTTCAGC
GATCGCATTT TGCACGCTTG GCAACCCCGC CTCAAATCCT TTACCGAACT GGCCTATGGC
TATCTGCCGC TGGTGTTGGC GGCGAGCCTC GCTCACTACC TTTGGATGGG GTTAACAGAA
CTGGGACAAG TCCTACCACG CACGGCCCTT AGCTTTGGCT GGTCACCCAC CAATCTCCTG
CAATACAGTG CTGACCCTGC CGTGATTGCC TTCTTGCAGG CGAGCAGCTT GATCTTAGGG
CTCGTCACCA CCTTATTGGT CACTCAAAAA ATCGCCCGCC AGCCCTGGCG ATCGCTGCTG
CCCCAACATA GTCTGGCCGT GGGGTTCACC AGCCTGCTCT GGCAGTTGAT TGTCTAG
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| Protein sequence | METSDKQRWL LENTLFNGLS ERAIAAIATG LSEVTVPSGQ VLSDLDSLPN ALLILVHGEL
DRQQPMTGQC DRLLPGSVLN LREILLQQPV TQQVTTATDV LVWQLSAEQL QAIATELNEL
DRYLSAQLAA ELDAVTAQLR FEQARLRELQ PYVIPKTKRG IVGSSRYAQR LRQEIRQASI
RNDRQPVLIF GEPGLGKDNI AALIHFGSRD RREPLIKINC NTLQPNGAEL FGRINERRGL
LDWVGKGTVL LNNVQDLPTD LRSRVIELLA TGYYRPLPTL QVPEPEPQAC LARLILVAET
NPTDLARHCV QTIKVPPLRI RKADIVASVK YFLSRFCQTR RQPRPKLTPE AERQLQNYDY
PGNITELESL VERALVQSGQ AAVLTEDVFW FASTKGDRFR WNLLNAYPRL RQLLRSDWWP
TRINYGLILG VYTAVVALLF WGPQTRAENV GLTLFWAGWW PLILLAFPFV GRLWCAYCPF
MIYGELVQWV SLKLWPRSLL PWPRAAAERW GGWFLFGLFA LILLWEELWH LEDVAWLSAC
LLLLITAGAV TFSLLFERRF WCRYLCPIGG MNGLFAKLAV IELRAKRGVC SATCNTYQCY
KGGPAKGEGQ ETMGCPVYSH PAQLVDNRNC VLCMTCLKAC PHRSVELNLR PPAIELWTTH
VATRSEAALL FLLLGAVFLH HLPQIAQVLG LGDRWLTSLG LHAILATAVL GTPGLLAFFS
DRILHAWQPR LKSFTELAYG YLPLVLAASL AHYLWMGLTE LGQVLPRTAL SFGWSPTNLL
QYSADPAVIA FLQASSLILG LVTTLLVTQK IARQPWRSLL PQHSLAVGFT SLLWQLIV
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