| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0998 |
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| Symbol | |
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| ID | 3773925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1005621 |
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| End bp | 1007519 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637799417 |
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| Product | FtsH peptidase |
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| Protein accession | YP_400015 |
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| Protein GI | 81299807 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.438302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC CTCTCACCCC GTCCCGCACC CGTTCTTCTT GGCGTTTTGT CTGGGTGCTG
CTGCTCGGAT TGAGTTTGGG TGGCGGCAAC ATTCCACCGG CCTTCGCCCA AAATCGCAGC
GAGCCAACGA CAGTCTCCCT CGATTACTCG GGCCTGCTCA AAGATATTGC GGACGGCCAA
GTCCAAAGTA TTGACTACGA CCCCGTGCAG CGCGTTGCTC GGGTGCAACT GCAAGGGCGG
CGCAGTGCAG AAGTCCCGCT ATTTAACCAA AATCCAGAGT TAATCGAGAC GGCACGCCGC
TACAACGTGC CCTTTGAGGT CACACCGACA CAGGACAACA GCGCCTTAGC AGGCACGCTG
GTCAACCTCG GGCTGATTTT GATCCTGATC GTCGGCCTGG TTTTTCTGCT GCGGCGATCG
GCAGGAGCTG CCAACCAAGC CTTGAACTTT GGTAAGTCCC GTGCCCGCTT TCAAATGGAA
GCCAAAACCG GCGTGATGTT TGAAGACGTG GCCGGCATTG AAGAAGCGAA GGAAGAGCTA
CAGGAAGTCG TTTCTTTCCT GCGTAGTTCC GATCGCTTCA CCGCTGTTGG GGCTCGCATT
CCACGCGGGG TGTTGTTGGT TGGCCCCCCG GGGACGGGGA AAACACTGCT GGCTAAGGCG
ATCGCCGGTG AAGCAGGCGT GCCGTTTTTC AGTATGTCCG GCTCCGAATT TGTGGAGATG
TTTGTCGGCG TTGGCGCGAG CCGCGTTCGC GATCTGTTCC GTAAAGCCAA GGAAAACTCT
CCTTGCATCG TCTTCATCGA TGAGATCGAT GCAGTTGGAC GGCAGCGTGG GGCTGGCATT
GGCGGTGGCA ATGACGAGCG GGAACAAACC CTCAATCAAT TGCTGACTGA AATGGATGGC
TTTGAGGAAA ACTCGGGCGT CATCATTATT GCGGCGACCA ACCGTCCTGA TGTGCTCGAT
TCCGCCTTAC TCCGTCCCGG CCGCTTCGAT CGCCAAATCA CCGTTGATCT CCCGAGCTAC
AACGGTCGCC TCGGGATTTT GCAAGTCCAT GCTCGCAATA AAAAACTGGC CGAAGAGGTT
TCCTTGGAAG CGATCGCGCG GCGAACACCA GGCTTTTCGG GGGCCGAGTT GGCAAATCTG
CTCAACGAAG CAGCGATTCT GACGGCCCGG CGCAATAAAA CTGCCGTGGA TGAAACTGAT
ATTGATGATG CGATCGATCG CGTCACGATT GGCATGACGC TTTCGCCGCT GCTCGACAGT
CAGAAAAAGC GGCTGATTGC CTATCACGAA ATCGGCCATG CTTTGCTGAT GACCTTGCTC
AAGCATTCCG ATCGCTTGGA CAAAGTCACA ATTATTCCGC GATCAGGGGG GATTGGCGGC
TTTGCCAAAC CGATTCCTAA CGAGGAATTG ATCGATAGCG GTCTCTATAG CCGTGCTTGG
TTGCGCGATC GCATTGTCGT TGCCTTGGGT GGGCGCGCTG CTGAAGAAGT CGTCTTTGGG
GATGCGGAAG TCACGCAAGG TGCCGCTTCT GACATCGAGA TGATTACAAA TCTGGCTCGG
GAAATGATCA CCCGCTACGG CATGTCCGAT CTGGGTCCTT TGGCACTCGA AAGTGATCAA
GGCGAAGTCT TCCTCGGTCG AGATTGGATG TCGCGGCGAG CAGACTATTC TGAAAGTGTT
GCCGCACAGA TTGACCGCAA GATTCGGGCT TTGATTCAAA CCTGTCATGC CGAAGCGCGC
CAACTGCTGT TAGAGAACCG CGAGCTGATG GATCGACTCG TCGATCGCTT GATCGATCAA
GAACTGATTG AGGGCGATGA ATTTCGCAAA ATTGTTGAAC AATTTCCGAA ATCGAGTGCA
GTGACTCAGC CAGCGATCCA AGCACCCGCT GTGTTTTAG
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| Protein sequence | MPKPLTPSRT RSSWRFVWVL LLGLSLGGGN IPPAFAQNRS EPTTVSLDYS GLLKDIADGQ
VQSIDYDPVQ RVARVQLQGR RSAEVPLFNQ NPELIETARR YNVPFEVTPT QDNSALAGTL
VNLGLILILI VGLVFLLRRS AGAANQALNF GKSRARFQME AKTGVMFEDV AGIEEAKEEL
QEVVSFLRSS DRFTAVGARI PRGVLLVGPP GTGKTLLAKA IAGEAGVPFF SMSGSEFVEM
FVGVGASRVR DLFRKAKENS PCIVFIDEID AVGRQRGAGI GGGNDEREQT LNQLLTEMDG
FEENSGVIII AATNRPDVLD SALLRPGRFD RQITVDLPSY NGRLGILQVH ARNKKLAEEV
SLEAIARRTP GFSGAELANL LNEAAILTAR RNKTAVDETD IDDAIDRVTI GMTLSPLLDS
QKKRLIAYHE IGHALLMTLL KHSDRLDKVT IIPRSGGIGG FAKPIPNEEL IDSGLYSRAW
LRDRIVVALG GRAAEEVVFG DAEVTQGAAS DIEMITNLAR EMITRYGMSD LGPLALESDQ
GEVFLGRDWM SRRADYSESV AAQIDRKIRA LIQTCHAEAR QLLLENRELM DRLVDRLIDQ
ELIEGDEFRK IVEQFPKSSA VTQPAIQAPA VF
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