Gene Synpcc7942_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0886 
Symbol 
ID3774063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp893112 
End bp893582 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content57% 
IMG OID637799302 
Product30S ribosomal protein S7 
Protein accessionYP_399903 
Protein GI81299695 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00092509 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCGTC GTACCTCTGC TCAAAAGCGT TCGGTTAACC CGGATCCAAA ATTCAACAGC 
CGCTTGGCCT CCATGATGGT GGCTCGCCTG ATGGACTCGG GCAAAAAGTC CCTGGCTTTC
CGCATCCTCT ACTCAGCCTT CGATCTGATC CAAGAGCGGA CCGGAAACGA CCCCTTGGAA
CTCTTCGAAC AAGCCGTGCG CAATGCCACC CCCTTGGTGG AAGTGCGAGC TCGTCGGGTA
GGTGGTGCAA CCTACCAAGT CCCGATGGAA GTTCGCTCGG AGCGCGGTAC CGCCATGGCC
CTGCGCTGGT TGGTTCAGTA TTCCCGTCAG CGCCCTGGCA AGTCCATGGC CATCAAGCTG
GCAAACGAGC TGATGGATGC AGCCAACGAA ACCGGAAGTT CAGTGCGTAA ACGCGAAGAA
ACCCACAAAA TGGCCGAAGC GAACAAGGCT TTTGCCCACT ACCGCTACTA G
 
Protein sequence
MSRRTSAQKR SVNPDPKFNS RLASMMVARL MDSGKKSLAF RILYSAFDLI QERTGNDPLE 
LFEQAVRNAT PLVEVRARRV GGATYQVPME VRSERGTAMA LRWLVQYSRQ RPGKSMAIKL
ANELMDAANE TGSSVRKREE THKMAEANKA FAHYRY