Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0886 |
Symbol | |
ID | 3774063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 893112 |
End bp | 893582 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799302 |
Product | 30S ribosomal protein S7 |
Protein accession | YP_399903 |
Protein GI | 81299695 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0049] Ribosomal protein S7 |
TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00092509 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCGTC GTACCTCTGC TCAAAAGCGT TCGGTTAACC CGGATCCAAA ATTCAACAGC CGCTTGGCCT CCATGATGGT GGCTCGCCTG ATGGACTCGG GCAAAAAGTC CCTGGCTTTC CGCATCCTCT ACTCAGCCTT CGATCTGATC CAAGAGCGGA CCGGAAACGA CCCCTTGGAA CTCTTCGAAC AAGCCGTGCG CAATGCCACC CCCTTGGTGG AAGTGCGAGC TCGTCGGGTA GGTGGTGCAA CCTACCAAGT CCCGATGGAA GTTCGCTCGG AGCGCGGTAC CGCCATGGCC CTGCGCTGGT TGGTTCAGTA TTCCCGTCAG CGCCCTGGCA AGTCCATGGC CATCAAGCTG GCAAACGAGC TGATGGATGC AGCCAACGAA ACCGGAAGTT CAGTGCGTAA ACGCGAAGAA ACCCACAAAA TGGCCGAAGC GAACAAGGCT TTTGCCCACT ACCGCTACTA G
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Protein sequence | MSRRTSAQKR SVNPDPKFNS RLASMMVARL MDSGKKSLAF RILYSAFDLI QERTGNDPLE LFEQAVRNAT PLVEVRARRV GGATYQVPME VRSERGTAMA LRWLVQYSRQ RPGKSMAIKL ANELMDAANE TGSSVRKREE THKMAEANKA FAHYRY
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