Gene Synpcc7942_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0630 
Symbol 
ID3775613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp622432 
End bp623574 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content61% 
IMG OID637799042 
Producthypothetical protein 
Protein accessionYP_399649 
Protein GI81299441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.313978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.987358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTT ATCCACTCAT CACCGCTGCC CTACTGACTG CTGGAGGGTT GGCAGCCGTC 
CCCGTCCCCC CTGCCCAAGC CGCCCTGTTT GGACAACAGC CGATCGCAGA ACAACAGGCC
GTGGTCATCC TGCGTCCGCT TGGCATCAAC CGCTACGACG TGCTGGTCAT TGAAGAGAAA
CAGATTGGCA GTCAGCGCTG TTGGCGCGAT CGCGGCGATG GTACCGTCGA GCCGCTGCTG
CTCAACTTTG ACTTCACTGG CATTTGCGAT CGCGCTACTG ACAGCAATGG CTATTCCCTG
CGCATGGGCG GTGAAGAGTT GGGTCTGCGC TACCGTCTCG AAGTCCGTAC CCAAGAGTCC
CAAGCGCTGC TCGTGGCAGT GCCTTTTGAT GGTCGCAGCC CTACCATTCC CCTAGGTACT
ACGCGCCGCC TAGTGCGTGA CTTTCTCAAG GTCGACCTAC TTCCCAACTG GAAACTGGCC
CGCCGCACCT ACGAAGGACA ACCTCTCGGA CACTACTACT TCTCCGCCGA TCAGACCCTG
GCGGCCTACA GTGCCAGCAA TCCTAATTTG GTAGCGATCG CCCCTCAGCA GACCCCCTCT
GCCGCTTTGC GGCCGCTCAC TCCGTCAGCG CTGCCTAGTG TGGGAGATCA GCAACCGATT
CCGATTCCCG TGGTGCGCCT CGATCAGCCG AACCTCAGCC CGAGCCCAGC CACTCGTCCA
GCGATGCCGA TCACACCGGC TCCCGCAGCC ACCCTCCCTT TGCGATCGCC CAATTTTCCA
GCAGCCCAGC AACCCACACC TGTCACGCCA GCCCCGACTC CCTCCCTTCG TCCCTTGCGA
TCGCCGACCC CTGCACCGAC TGCAACGCCC AGCACCGCCA GTAATCCCGA TCGCTTCACC
ATCAGCCGGA ATGGACAACT CAGCAGCGAT GCCTTTCTGG TGATTGTGCC GGTCACCGCC
GGTAGCCCTC AGGCCTTAAT TCAGCGGATT CAACAACTGG GAGTTCCCGC CAGCAATATT
TTTGAGCGGG GGCCGCGCGA AGTGGCACTC GGCCCCTTCC GCAACCGCAG CCTAGCGGAA
CAGTGGCAAA CCCACCTCAG CCAGCAAGGG GGACTCAACG GCAGAGTCGA GTTTGGTCGC
TGA
 
Protein sequence
MRRYPLITAA LLTAGGLAAV PVPPAQAALF GQQPIAEQQA VVILRPLGIN RYDVLVIEEK 
QIGSQRCWRD RGDGTVEPLL LNFDFTGICD RATDSNGYSL RMGGEELGLR YRLEVRTQES
QALLVAVPFD GRSPTIPLGT TRRLVRDFLK VDLLPNWKLA RRTYEGQPLG HYYFSADQTL
AAYSASNPNL VAIAPQQTPS AALRPLTPSA LPSVGDQQPI PIPVVRLDQP NLSPSPATRP
AMPITPAPAA TLPLRSPNFP AAQQPTPVTP APTPSLRPLR SPTPAPTATP STASNPDRFT
ISRNGQLSSD AFLVIVPVTA GSPQALIQRI QQLGVPASNI FERGPREVAL GPFRNRSLAE
QWQTHLSQQG GLNGRVEFGR