Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0580 |
Symbol | |
ID | 3774818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 560720 |
End bp | 562537 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798988 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_399599 |
Protein GI | 81299391 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0863238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0511746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAATC CCACATTTGG CAATCGCGAC TCGGGCCGCA GTGTTGGCCG CTCCTATCAG TCGCTATGGC TGCTCTTGGG AATCACCACC GTCTTTTTTG GGGCTTTGGG TGGCCGCCTC GCCTACATGC AAATTCAGCA GGGCGAACGA AATCGCGAAC TGGCCAACGA GAATCGCATC CACCTGTTGC CTCGCCTCCC TGAACGTGGA CGTATCCTCG ACCGCGAAGG GCGTGTATTA GCGAGTAGCC GCCACGTTTA CTCACTCTAT GTTTGGCCGC TGGCAATTAA AGACGACCGC TGGCCCGATA CCCGACGCCG GCTAGCCGAG CTACTCAAAG TGCCGGAGTC TACGCTGCAA GCCCGCATCG ATCGCCAGAA AGACAATGCC GCTTATCGAG TTCGCCTGGC CCAAAATCTG AGCCAACCCC AAGTTATTGC TTTTGAAGAA AATCGCCGTA ACTTCATCGG CGTCGAAGTG GACTACGACA GCGTGCGCTA CTACCCCAAT GGGTCAATCG CAGCCCACGT TTTGGGGTAC ACCGGCGAGA TTTCGGATGA GGAATTAAAA CGGCGCGAGG AACAAGGATA TCGACCTGGC GATGTCATTG GCCAAGCTGG ACTCGAAGCC GCCTTTGAGA AGCAGTTGCG CGGTGAGTGG GGCGGTCAAC AGGTAGAAGT GGATGCCCTC GGCAACGTCG TCCGCATTTT GGGCGACAAG CAAGCGCGAG CGGGCAAAGA TGTCACCATC ACACTGGATC TCGATCTGCA AAAAGCAGCA GAGGCTGCGA TCGGCAACAG CATGGGGGCG ATCGTGGCGA TCGATCCTCG GGACGGCAGC ATCTTGGCGA TGGTCAGCCG TCCCACCTAC GATCCCAACG TCTTTGCCAC CGAAATCAGC CAGGCCGAAT GGGATCGACT GCAGCAGCTG GAATTCCCCT TCGTCAATCG CGCTCTGCAG TCCTTTCCGC CAGCCAGTAC GTTCAAGATT GTGACCACAG CAGCGGCCTT GGAATCGGGC AAATATTCCC CCGACACCGT GCTGCAAACC TTCCCCTTCC TGCGGGTTGG CGGCATTCAG TTTTGGGACT GGAATAATGC GGGCTTTGGT CCCCTCGGCT TTGTAGGCGC AATGCGCTAT AGCAGCGACA CCTTCTTCTA CCAAGTCGCT CAGCGGATTG GCGGCGACGC GATCGCAGCC ATGTGCCGTC GGTTTGGCAT GGGGCAGCGT ACAGGGGTAG AGCTTGCCGC GGAGGAAGGG CGGGGTCTTG TGCCCGACAA AGCTTGGAAA CTGAAGAACC TGAATGAGGA ATGGACCGTC GGCGACTCGA TCAATATGTC CATTGGTCAA GGCTTCTTAC TGCAAACGCC ACTGCAAGTC GCGGTGATGT TTGCGATTCC AGCCAATAAC GGCTTCCGGG TAAAACCGCA CTTCCTCAAG GACGATCGCG ACAGCAAAGA ATGGCGCGAG GATCTGAAAC TGAAGCCATC CACGATGAAA GTCATCCGGG ACGGGCTAGT CTCAGTCGTC GCGGATGGAA CTGGAGCTGC CCTGCGAGTG CCCTCACTGC CGCCCAACGC AGGCAAAACT GGAACAGCGG AGGATCCGCC CCGGCGATCG CACACTTGGT ATGGCGGCTA TGCACCGATT GAGAAACCTG AGATCGTCGT CGTTTCCTTC AACGAAAACT CAGGCGGCGG CGGTGGCAGT ACAGCGGCTC CAAAAGTCCG TCAAGTGATG GAAGCCTACT TCCGCAAGAA GGCGCTTCGA GCTCAGGCCG CTAAGGGTAA GCAACCATCT GCCAACACCT CGCAGTAG
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Protein sequence | MANPTFGNRD SGRSVGRSYQ SLWLLLGITT VFFGALGGRL AYMQIQQGER NRELANENRI HLLPRLPERG RILDREGRVL ASSRHVYSLY VWPLAIKDDR WPDTRRRLAE LLKVPESTLQ ARIDRQKDNA AYRVRLAQNL SQPQVIAFEE NRRNFIGVEV DYDSVRYYPN GSIAAHVLGY TGEISDEELK RREEQGYRPG DVIGQAGLEA AFEKQLRGEW GGQQVEVDAL GNVVRILGDK QARAGKDVTI TLDLDLQKAA EAAIGNSMGA IVAIDPRDGS ILAMVSRPTY DPNVFATEIS QAEWDRLQQL EFPFVNRALQ SFPPASTFKI VTTAAALESG KYSPDTVLQT FPFLRVGGIQ FWDWNNAGFG PLGFVGAMRY SSDTFFYQVA QRIGGDAIAA MCRRFGMGQR TGVELAAEEG RGLVPDKAWK LKNLNEEWTV GDSINMSIGQ GFLLQTPLQV AVMFAIPANN GFRVKPHFLK DDRDSKEWRE DLKLKPSTMK VIRDGLVSVV ADGTGAALRV PSLPPNAGKT GTAEDPPRRS HTWYGGYAPI EKPEIVVVSF NENSGGGGGS TAAPKVRQVM EAYFRKKALR AQAAKGKQPS ANTSQ
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