Gene PMT9312_1676 details

Gene Information

• Locus tag: PMT9312_1676
• ID: 3766498
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 1565795
• End bp: 1566430
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 637798218
• Product: putative ribonuclease D
• Protein accession: YP_398173
• Protein GI: 78780061
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0349] Ribonuclease D

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.137272
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTATTG AAAATAAAAA TATTGATTTT CTTTATAGTG ATTTAACAGC AGATTTATAT 
AATATCTATA AAAAATCATC CTACCTTGCT ATTGACACTG AAGCAATGGG GTTGATTCAT 
GGAAGAGATA GATTATGTTT AGTACAAATA TGCAATGAAC TTAGAAGAAC AGCCTGTATA 
AAAATCGAAC TTAATAGATC TTCTGCTCCC AATTTAAAAG CACTTCTTGA AGATGAAAAA 
ATTACTAAAA TCTTTCACTA TGCAAGATTT GATGTAGCAG CGCTAAAATG CAATCTTGGA 
ATTAATACAA AAAATATTTT TTGTACAAAA ATTGCAAGTA AGTTGGCAAG AACATATACA 
AATAAACACG GTTTAAAAGA TTTAATTAAT GAATTGTTAG GGGTAGAATT AGACAAAAGT 
TCACAAAGCA GTGATTGGGG TAGCAAAGAA GATTTAACAA AAGATCAATT AGATTATGCT 
TCAAATGATG TTAGATATTT AATTGAAGCG ATGCATAAAT TAAAAGTCAT CTTAGATAGA 
GAGAATAGAT ATGAGTTAGC TCAAAAATGT TTCAAAACAG TTTCAGTTCA TGCTGATTTA 
GACATCCTAA AATTTTCAAA TATATTTGAA CATTAA 

 

Protein sequence

MTIENKNIDF LYSDLTADLY NIYKKSSYLA IDTEAMGLIH GRDRLCLVQI CNELRRTACI 
KIELNRSSAP NLKALLEDEK ITKIFHYARF DVAALKCNLG INTKNIFCTK IASKLARTYT 
NKHGLKDLIN ELLGVELDKS SQSSDWGSKE DLTKDQLDYA SNDVRYLIEA MHKLKVILDR 
ENRYELAQKC FKTVSVHADL DILKFSNIFE H