Gene PMT9312_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1600 
Symbol 
ID3766418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1496941 
End bp1498140 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content40% 
IMG OID637798138 
Productelongation factor Tu 
Protein accessionYP_398096 
Protein GI78779984 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCG AGAAGTTCGA AAGGAACAAA CCACATGTCA ACATAGGTAC TATTGGCCAT 
GTTGATCATG GAAAAACAAC ACTTACTGCT GCTATTACAA ACGTATTAGC AAAAAAAGGT
CAAGCTCAAG CTCAAGACTA TGGAGACATT GATGGTGCTC CTGAAGAAAG AGAGCGCGGC
ATTACTATTA ATACAGCTCA CGTCGAATAT GAAACTGAAG GCAGGCATTA TGCTCATGTT
GATTGCCCTG GACATGCTGA TTATGTAAAA AACATGATTA CAGGAGCCGC CCAAATGGAC
GGAGCTATTC TAGTTTGTGC AGCCACCGAT GGCCCTATGG CGCAAACAAA AGAGCATATT
CTTCTAGCTA AACAGGTTGG AGTACCTGCT CTTGTAGTAG CTCTTAACAA GTGCGATATG
GTCGATGATG AAGAAATTAT TGAACTTGTT GAAATGGAAA TCAGAGAACT ATTAGATAGT
TATGATTTCC CTGGAGATGA TATTCCTATA GTTCAAGTTT CAGGTTTAAA AGCTCTTGAA
GGTGATTCTA CTTGGGAATC AAAAATAGAA GAATTAATGA CAGCAGTTGA TGCAAGCATT
CCTGAACCAG AAAGAGAAGT TGATAAACCA TTCTTGATGG CAGTTGAAGA CGTTTTCTCA
ATTACTGGTA GAGGAACTGT AGCTACTGGA AGAATTGAAA GAGGAAAAGT TAAGGTTGGA
GAAGAAGTTG AAATAGTTGG AATAAGAGAT ACAAGATTGA CAACAGTTAC TGGAGTTGAA
ATGTTCCGTA AACTTCTTGA TGAAGGTATG GCTGGTGATA ATGTTGGTTT ACTTTTACGT
GGTGTTCAGA AAGAGGATAT TGAGAGAGGA ATGGTACTCG TTAAGAAAGG ATCCATTACC
CCTCATACTC AGTTTGAAGG AGAAGTTTAC GTTCTAAAGA AAGAAGAGGG CGGCAGACAT
ACACCTTTCT TCGCAGGTTA TAGGCCTCAG TTTTATATCC GAACAACTGA TGTGACAGGT
CAAATCACAG CCTTTACTTC TGATGACGGT TCTAATGTTG AAATGGTTAT GCCAGGTGAC
AGAATCAAGA TGACTGGAGA ATTAATTTGT CCAGTAGCTA TTGAACAAGG TATGCGATTT
GCAATTCGTG AAGGTGGACG TACTATTGGT GCTGGAGTTG TTTCTAAAAT TCTCAAATAA
 
Protein sequence
MAREKFERNK PHVNIGTIGH VDHGKTTLTA AITNVLAKKG QAQAQDYGDI DGAPEERERG 
ITINTAHVEY ETEGRHYAHV DCPGHADYVK NMITGAAQMD GAILVCAATD GPMAQTKEHI
LLAKQVGVPA LVVALNKCDM VDDEEIIELV EMEIRELLDS YDFPGDDIPI VQVSGLKALE
GDSTWESKIE ELMTAVDASI PEPEREVDKP FLMAVEDVFS ITGRGTVATG RIERGKVKVG
EEVEIVGIRD TRLTTVTGVE MFRKLLDEGM AGDNVGLLLR GVQKEDIERG MVLVKKGSIT
PHTQFEGEVY VLKKEEGGRH TPFFAGYRPQ FYIRTTDVTG QITAFTSDDG SNVEMVMPGD
RIKMTGELIC PVAIEQGMRF AIREGGRTIG AGVVSKILK