Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1600 |
Symbol | |
ID | 3766418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1496941 |
End bp | 1498140 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637798138 |
Product | elongation factor Tu |
Protein accession | YP_398096 |
Protein GI | 78779984 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCGCG AGAAGTTCGA AAGGAACAAA CCACATGTCA ACATAGGTAC TATTGGCCAT GTTGATCATG GAAAAACAAC ACTTACTGCT GCTATTACAA ACGTATTAGC AAAAAAAGGT CAAGCTCAAG CTCAAGACTA TGGAGACATT GATGGTGCTC CTGAAGAAAG AGAGCGCGGC ATTACTATTA ATACAGCTCA CGTCGAATAT GAAACTGAAG GCAGGCATTA TGCTCATGTT GATTGCCCTG GACATGCTGA TTATGTAAAA AACATGATTA CAGGAGCCGC CCAAATGGAC GGAGCTATTC TAGTTTGTGC AGCCACCGAT GGCCCTATGG CGCAAACAAA AGAGCATATT CTTCTAGCTA AACAGGTTGG AGTACCTGCT CTTGTAGTAG CTCTTAACAA GTGCGATATG GTCGATGATG AAGAAATTAT TGAACTTGTT GAAATGGAAA TCAGAGAACT ATTAGATAGT TATGATTTCC CTGGAGATGA TATTCCTATA GTTCAAGTTT CAGGTTTAAA AGCTCTTGAA GGTGATTCTA CTTGGGAATC AAAAATAGAA GAATTAATGA CAGCAGTTGA TGCAAGCATT CCTGAACCAG AAAGAGAAGT TGATAAACCA TTCTTGATGG CAGTTGAAGA CGTTTTCTCA ATTACTGGTA GAGGAACTGT AGCTACTGGA AGAATTGAAA GAGGAAAAGT TAAGGTTGGA GAAGAAGTTG AAATAGTTGG AATAAGAGAT ACAAGATTGA CAACAGTTAC TGGAGTTGAA ATGTTCCGTA AACTTCTTGA TGAAGGTATG GCTGGTGATA ATGTTGGTTT ACTTTTACGT GGTGTTCAGA AAGAGGATAT TGAGAGAGGA ATGGTACTCG TTAAGAAAGG ATCCATTACC CCTCATACTC AGTTTGAAGG AGAAGTTTAC GTTCTAAAGA AAGAAGAGGG CGGCAGACAT ACACCTTTCT TCGCAGGTTA TAGGCCTCAG TTTTATATCC GAACAACTGA TGTGACAGGT CAAATCACAG CCTTTACTTC TGATGACGGT TCTAATGTTG AAATGGTTAT GCCAGGTGAC AGAATCAAGA TGACTGGAGA ATTAATTTGT CCAGTAGCTA TTGAACAAGG TATGCGATTT GCAATTCGTG AAGGTGGACG TACTATTGGT GCTGGAGTTG TTTCTAAAAT TCTCAAATAA
|
Protein sequence | MAREKFERNK PHVNIGTIGH VDHGKTTLTA AITNVLAKKG QAQAQDYGDI DGAPEERERG ITINTAHVEY ETEGRHYAHV DCPGHADYVK NMITGAAQMD GAILVCAATD GPMAQTKEHI LLAKQVGVPA LVVALNKCDM VDDEEIIELV EMEIRELLDS YDFPGDDIPI VQVSGLKALE GDSTWESKIE ELMTAVDASI PEPEREVDKP FLMAVEDVFS ITGRGTVATG RIERGKVKVG EEVEIVGIRD TRLTTVTGVE MFRKLLDEGM AGDNVGLLLR GVQKEDIERG MVLVKKGSIT PHTQFEGEVY VLKKEEGGRH TPFFAGYRPQ FYIRTTDVTG QITAFTSDDG SNVEMVMPGD RIKMTGELIC PVAIEQGMRF AIREGGRTIG AGVVSKILK
|
| |